RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TK1P04183 234 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 UBBP0CG47 229 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 UBCP0CG48 685 aaKnown RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 ABOP16442 354 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 CAV2P51636 162 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 RPS27AP62979 156 aaKnown RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 UBA52P62987 128 aaKnown RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 EMX1Q04741 257 aaPredicted RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 YOD1Q5VVQ6 348 aaPredicted RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 MEX3BQ6ZN04 569 aaKnown RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 PGAP1Q75T13 922 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 FAM217AQ8IXS0 508 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 UCN3Q969E3 161 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 SNX18Q96RF0 628 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 SLC29A1Q99808 456 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 NICN1Q9BSH3 213 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 METTL9Q9H1A3 318 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 TMEM38AQ9H6F2 299 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 PRMT8Q9NR22 394 aaPredicted RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 PPP1R14DQ9NXH3 145 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 MYOTQ9UBF9 498 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 SSC5DA1L4H1 1573 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 ALPLP05186 524 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 EIF1P41567 113 aaKnown RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 RGRP47804 291 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 ILKQ13418 452 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 LPCAT3Q6P1A2 487 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 TSSK4Q6SA08 328 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 SERPINA12Q8IW75 414 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 WDR83Q9BRX9 315 aaKnown RBP6.04□□□□□ -1.44
LSAMP-207ENST00000539563 MS4A8Q9BY19 250 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 PRSS16Q9NQE7 514 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 LHX6Q9UPM6 363 aa6.04□□□□□ -1.44
LSAMP-207ENST00000539563 NINQ8N4C6 2090 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 LOC105369274A0A096LPK9 316 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PRAMEF27A3QJZ7 478 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SERINC4A6NH21 518 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ARPC5O15511 151 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 EIF1BO60739 113 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 UTS2O95399 124 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SYPL1Q16563 259 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PRAMEF9Q5VWM5 478 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 TANGO2Q6ICL3 276 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 DPY19L2P2Q6ZN68 376 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 CMIPQ8IY22 773 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR4N4Q8N0Y3 316 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SLC38A5Q8WUX1 472 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SLC6A18Q96N87 628 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SLC25A18Q9H1K4 315 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ANKRD19PQ9H560 264 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 FBXO7Q9Y3I1 522 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ETV7Q9Y603 341 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MCM3APO60318 1980 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 TLCD2A6NGC4 264 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 J3KTA2 159 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ADAM12O43184 909 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 GASTP01350 101 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 APOC3P02656 99 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SERPINA2P20848 420 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NR4A2P43354 598 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 HTR5AP47898 357 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 CXADRP78310 365 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 CHRNEQ04844 493 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MGAT3Q09327 533 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 EXT1Q16394 746 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SLC35D3Q5M8T2 416 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF534Q76KX8 674 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 KLHDC8BQ8IXV7 354 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF679Q8IYX0 411 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ACBD4Q8NC06 268 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR6T1Q8NGN1 323 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ELSPBP1Q96BH3 223 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 USB1Q9BQ65 265 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 CMSS1Q9BQ75 279 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PRDM9Q9NQV7 894 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 VSX1Q9NZR4 365 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 TRAV36DV7A0A075B6V5 113 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ARGFXA6NJG6 315 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF780AO75290 641 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF44P15621 663 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MSR1P21757 451 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PSMB5P28074 263 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 GPLD1P80108 840 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 RBM39Q14498 530 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 C3orf38Q5JPI3 329 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 EXOSC6Q5RKV6 272 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 HENMT1Q5T8I9 393 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SLC16A14Q7RTX9 510 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 DPY19L4Q7Z388 723 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NLRP8Q86W28 1048 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR4F15Q8NGB8 312 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR11L1Q8NGX0 322 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR2T35Q8NGX2 323 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NPRL2Q8WTW4 380 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 GGHQ92820 318 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ELMOD3Q96FG2 381 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF436Q9C0F3 470 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 LYRM4Q9HD34 91 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NUMBLQ9Y6R0 609 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 TDRD15B5MCY1 1934 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms