RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 LTBQ06643 244 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 TMEM176BQ3YBM2 270 aaPredicted RBP11.65□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF585AQ6P3V2 769 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 RPTNQ6XPR3 784 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 GDF7Q7Z4P5 450 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 HIPK1Q86Z02 1210 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 ZDHHC13Q8IUH4 622 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 NKAIN4Q8IVV8 208 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 NAXEQ8NCW5 288 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 PRR7Q8TB68 274 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 ZPLD1Q8TCW7 415 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 SDCCAG3Q96C92 435 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 KLHL15Q96M94 604 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 PIP5K1AQ99755 562 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 CIB1Q99828 191 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 FUZQ9BT04 418 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 TRIM2Q9C040 744 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 REEP1Q9H902 201 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 RHCGQ9UBD6 479 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 CHRNA9Q9UGM1 479 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 ERRFI1Q9UJM3 462 aaPredicted RBP11.65□□□□□ -0.54
CCDC42-202ENST00000539522 OAZ3Q9UMX2 235 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 MEMO1Q9Y316 297 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 MYO18BQ8IUG5 2567 aa11.65□□□□□ -0.55
CCDC42-202ENST00000539522 A0A087WUJ7 227 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 TRGV8A0A0C4DH27 118 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 CLCA1A8K7I4 914 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 FTCDNL1E5RQL4 147 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 EIF1AYO14602 144 aaKnown RBP11.64□□□□□ -0.55
CCDC42-202ENST00000539522 ZNF208O43345 1280 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 RAMP1O60894 148 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 E2F6O75461 281 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 AQP8O94778 261 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 GLI4P10075 376 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 UQCRBP14927 111 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 ZNF23P17027 643 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 ACVR2AP27037 513 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 IFNA8P32881 189 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 MYBPHQ13203 477 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 SYT14P1Q58G82 188 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 ALG10BQ5I7T1 473 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 WLSQ5T9L3 541 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 C3orf33Q6P1S2 294 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 ZNF613Q6PF04 617 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 SHQ1Q6PI26 577 aaKnown RBP11.64□□□□□ -0.55
CCDC42-202ENST00000539522 DEF8Q6ZN54 512 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 RANBP3LQ86VV4 465 aaPredicted RBP11.64□□□□□ -0.55
CCDC42-202ENST00000539522 GALNT4Q8N4A0 578 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 CBR4Q8N4T8 237 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 C9orf106Q8NAJ2 232 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 OR10D3Q8NH80 312 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 DNAJC9Q8WXX5 260 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 KTI12Q96EK9 354 aaPredicted RBP11.64□□□□□ -0.55
CCDC42-202ENST00000539522 EPYCQ99645 322 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 ZNF184Q99676 751 aaPredicted RBP11.64□□□□□ -0.55
CCDC42-202ENST00000539522 SLC29A1Q99808 456 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 TTYH2Q9BSA4 534 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 C12orf10Q9HB07 376 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 ING1Q9UK53 422 aaPredicted RBP11.64□□□□□ -0.55
CCDC42-202ENST00000539522 SLC7A7Q9UM01 511 aa11.64□□□□□ -0.55
CCDC42-202ENST00000539522 SAMHD1Q9Y3Z3 626 aaKnown RBP11.64□□□□□ -0.55
CCDC42-202ENST00000539522 AHRRA9YTQ3 701 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 FAM47E-STBD1D6RA91 191 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 LRRN3E7EW58 273 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 J3QKU1 62 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 TNFRSF11BO00300 401 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 LRRTM2O43300 516 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 CHP2O43745 196 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 CXCL13O43927 109 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 FPR1P21462 350 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 HTR3AP46098 478 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 HSPA13P48723 471 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 P2RY4P51582 365 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 NUP107P57740 925 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 GUSBP1Q15486 140 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 C1orf185Q5T7R7 199 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 NSUN5P2Q63ZY6 315 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 ULK3Q6PHR2 472 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 IZUMO2Q6UXV1 221 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 ESPNLQ6ZVH7 1005 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 STK32CQ86UX6 486 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 FJX1Q86VR8 437 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 ATCAYQ86WG3 371 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 OR2V1Q8NHB1 315 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 FNDC9Q8TBE3 224 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 SLC41A3Q96GZ6 507 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 DHRS1Q96LJ7 313 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 PRRC1Q96M27 445 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 TP63Q9H3D4 680 aaPredicted RBP11.63□□□□□ -0.55
CCDC42-202ENST00000539522 MEPEQ9NQ76 525 aaPredicted RBP11.63□□□□□ -0.55
CCDC42-202ENST00000539522 VNN3Q9NY84 501 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 SEC14L4Q9UDX3 406 aa11.63□□□□□ -0.55
CCDC42-202ENST00000539522 RP1L1Q8IWN7 2480 aaPredicted RBP11.63□□□□□ -0.55
CCDC42-202ENST00000539522 IGHV3-15A0A0B4J1V0 119 aa11.62□□□□□ -0.55
CCDC42-202ENST00000539522 TRAPPC13A5PLN9 417 aa11.62□□□□□ -0.55
CCDC42-202ENST00000539522 MBD3L4A6NDZ8 208 aaPredicted RBP11.62□□□□□ -0.55
CCDC42-202ENST00000539522 MBD3L3A6NE82 208 aaPredicted RBP11.62□□□□□ -0.55
CCDC42-202ENST00000539522 MBD3L5A6NJ08 208 aaPredicted RBP11.62□□□□□ -0.55
CCDC42-202ENST00000539522 CD8B2A6NJW9 211 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms