RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 DTYMKP23919 212 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FLT3LGP49771 235 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ID2Q02363 134 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 NOGQ13253 232 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 C4orf17Q53FE4 359 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 KIAA0895LQ68EN5 471 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FAM58AQ8N1B3 248 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 GABARAPL3Q9BY60 117 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SMIM3Q9BZL3 60 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ARRDC5A6NEK1 342 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SLC9B1P1A6NJY1 282 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 GASTP01350 101 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SYN1P17600 705 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 DCAF7P61962 342 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 HNRNPKP61978 463 aaKnown RBP eCLIP6.47□□□□□ -1.373e-7■■□□□ 13.3
SORT1-209ENST00000538502 SNTB1Q13884 538 aaKnown RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 OR1Q1Q15612 314 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 C18orf63Q68DL7 685 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 RAB3CQ96E17 227 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SLC6A20Q9NP91 592 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 NDUFB11Q9NX14 153 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 MUTYHQ9UIF7 546 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 RHBDD3Q9Y3P4 386 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 NALCNQ8IZF0 1738 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FEZF1A0PJY2 475 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 ANKRD30BLA7E2S9 258 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 LGALS8O00214 317 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 ANGPTL7O43827 346 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 TOX4O94842 621 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 ZNF44P15621 663 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 PRPH2P23942 346 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 GATMP50440 423 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 EBPQ15125 230 aaKnown RBP6.46□□□□□ -1.37
SORT1-209ENST00000538502 PDLIM3Q53GG5 364 aaPredicted RBP6.46□□□□□ -1.37
SORT1-209ENST00000538502 ADGRE4PQ86SQ3 457 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 RBM23Q86U06 439 aaKnown RBP6.46□□□□□ -1.37
SORT1-209ENST00000538502 GCNT2Q8N0V5 402 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 KLHDC1Q8N7A1 406 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 ZNF439Q8NDP4 499 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 OR5L1Q8NGL2 311 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 OR1J2Q8NGS2 313 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 RSPRY1Q96DX4 576 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 OR7D2Q96RA2 312 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 PATZ1Q9HBE1 687 aaKnown RBP6.46□□□□□ -1.37
SORT1-209ENST00000538502 AKIP1Q9NQ31 210 aa6.46□□□□□ -1.37
SORT1-209ENST00000538502 A0A1B0GUH1 482 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 NCR1O76036 304 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 PFKMP08237 780 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 NME2P22392 152 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 RNF4P78317 190 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 TMEM31Q5JXX7 168 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 CLLU1Q5K131 121 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 CHADLQ6NUI6 762 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 FBXW12Q6X9E4 464 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 IL34Q6ZMJ4 242 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 NLRC3Q7RTR2 1065 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 ZNF551Q7Z340 670 aaPredicted RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 CMTM8Q8IZV2 173 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 NPWQ8N729 165 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 RPL3LQ92901 407 aaKnown RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 KHSRPQ92945 711 aaKnown RBP eCLIP6.46□□□□□ -1.382e-8■■■□□ 17.6
SORT1-209ENST00000538502 CUTCQ9NTM9 273 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 ALKBH4Q9NXW9 302 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 DRGXA6NNA5 263 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 NPIPA7E9PJI5 369 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 FBXO24O75426 580 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 HOXB5P09067 269 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 NPIPA8P0DM63 369 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 RPL17P18621 184 aaKnown RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 SOX18P35713 384 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 RAB11AP62491 216 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 GATSQ8NAP1 163 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 GNPNAT1Q96EK6 184 aaPredicted RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 CMTM3Q96MX0 182 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 TGIF2Q9GZN2 237 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 POFUT1Q9H488 388 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 SPHK2Q9NRA0 654 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 TGM5O43548 720 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 CA12O43570 354 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 ACTL6BO94805 426 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 F2P00734 622 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 STATHP02808 62 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 TBPP20226 339 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 FPR3P25089 353 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 PAX6P26367 422 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 DUSP3P51452 185 aaPredicted RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 ACY1Q03154 408 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 TXNDC8Q6A555 127 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 ZNF100Q8IYN0 542 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 SLC22A24Q8N4F4 322 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 FIBINQ8TAL6 211 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 STT3BQ8TCJ2 826 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 SFXN2Q96NB2 322 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 DEFB126Q9BYW3 111 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 CPEB1Q9BZB8 566 aaKnown RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 WDR76Q9H967 626 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 GCM1Q9NP62 436 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 FZD1Q9UP38 647 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms