RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 HNRNPCL4P0DMR1 293 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 PRG2P13727 222 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 IDUAP35475 653 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 SLC16A1P53985 500 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 FOXG1P55316 489 aaPredicted RBP12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 H3F3AP84243 136 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 CEACAM7Q14002 265 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 RGNQ15493 299 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 OR7A5Q15622 319 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF672Q499Z4 452 aaPredicted RBP12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 TIMM23BQ5SRD1 257 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 OTUD3Q5T2D3 398 aaPredicted RBP12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 RNF220Q5VTB9 566 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 C9orf135Q5VTT2 229 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 WBP2NLQ6ICG8 309 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 OR52E4Q8NGH9 312 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 SMAP2Q8WU79 429 aaPredicted RBP12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 DYDC1Q8WWB3 177 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 COX4I2Q96KJ9 171 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 ASB6Q9NWX5 421 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 THUMPD1Q9NXG2 353 aaKnown RBP12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 NPAP1Q9NZP6 1156 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 CCDC167Q9P0B6 97 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF232Q9UNY5 417 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 A0A1W2PP18 115 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 C5orf58C9J3I9 102 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 FRS3O43559 492 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 AKR7A3O95154 331 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 PGM3O95394 542 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 TGDSO95455 350 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 LY6G6DO95868 133 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 GPIP06744 558 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 THBS1P07996 1170 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 CDKN1AP38936 164 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 MAP2K6P52564 334 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 AQP5P55064 265 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 HOXC5Q00444 222 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF311Q5JNZ3 666 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 SERPINA11Q86U17 422 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 P2RY8Q86VZ1 359 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 FUNDC1Q8IVP5 155 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 GOLGA6L1Q8N7Z2 621 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 TMEM99Q8N816 258 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 GTPBP3Q969Y2 492 aaKnown RBP12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 SPATA9Q9BWV2 254 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 TRIM2Q9C040 744 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 RAD21L1Q9H4I0 556 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF701Q9NV72 531 aaPredicted RBP12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 ADPRHL2Q9NX46 363 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 TAS2R16Q9NYV7 291 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 UPB1Q9UBR1 384 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 SLC9A8Q9Y2E8 581 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 IFT52Q9Y366 437 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 MAGED1Q9Y5V3 778 aaPredicted RBP12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 FLVCR1Q9Y5Y0 555 aa12.59□□□□□ -0.39
RTN3P1-201ENST00000536295 A0A096LPI6 279 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 LIPT2A6NK58 231 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 ABCD4O14678 606 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 HEXAP06865 529 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 ITGA5P08648 1049 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 DANCRP0C864 163 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 PAX1P15863 534 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 ZNF83P51522 516 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 CDH11P55287 796 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC17A1Q14916 467 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 BLOC1S3Q6QNY0 202 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 PAQR6Q6TCH4 344 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 GPAT4Q86UL3 456 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 SPDL1Q96EA4 605 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 TAPBPLQ9BX59 468 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 C1QTNF6Q9BXI9 259 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 A4GALTQ9NPC4 353 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC7A10Q9NS82 523 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 PARPBPQ9NWS1 579 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC25A37Q9NYZ2 338 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 CISD1Q9NZ45 108 aaKnown RBP12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 SLAMF8Q9P0V8 285 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 MALT1Q9UDY8 824 aa12.58□□□□□ -0.4
RTN3P1-201ENST00000536295 A8MVM7 634 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 FAM171A2A8MVW0 826 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 SHISA9B4DS77 424 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 TMCC2O75069 709 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 HOXB9P17482 250 aaPredicted RBP12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 PTNP21246 168 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 MRPL19P49406 292 aaKnown RBP12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 SPOCK1Q08629 439 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 FADDQ13158 208 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 GABRA6Q16445 453 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 ZSWIM7Q19AV6 140 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 PGGHGQ32M88 737 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 AGKQ53H12 422 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 PAGE3Q5JUK9 113 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 GCNT6Q5T4J0 391 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 TSPO2Q5TGU0 170 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 C1orf140Q5VVS0 124 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 MSRB3Q8IXL7 192 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 OR9K2Q8NGE7 335 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms