RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PDK3Q15120 406 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 OR1Q1Q15612 314 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 GTF2IRD2BQ6EKJ0 949 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 PPP4R4Q6NUP7 873 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 ARPINQ7Z6K5 226 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 GTF2IRD2Q86UP8 949 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 CCDC103Q8IW40 242 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 MCEMP1Q8IX19 187 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 OR52E4Q8NGH9 312 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 STK35Q8TDR2 534 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 SLC38A4Q969I6 547 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 DDIT4LQ96D03 193 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 C14orf79Q96F83 325 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 RBM24Q9BX46 236 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 PCDHAC1Q9H158 963 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 TESQ9UGI8 421 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 AP3M1Q9Y2T2 418 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 ABCA12Q86UK0 2595 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 ALPK2Q86TB3 2170 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 ABCA4P78363 2273 aa12.4□□□□□ -0.42
TSPAN4-220ENST00000532375 A0A087WUJ7 227 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 FAM221AA4D161 298 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 ZNF724A8MTY0 619 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 SMNDC1O75940 238 aaKnown RBP eCLIP12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 YES1P07947 543 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 CCKARP32238 428 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 SLC16A1P53985 500 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 OR2B6P58173 313 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 SORDQ00796 357 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 RASGEF1BQ0VAM2 473 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 DNAJA4Q8WW22 397 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 ZNF300Q96RE9 604 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 MCHR1Q99705 422 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 KLHL28Q9NXS3 571 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 PROCRQ9UNN8 238 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 EMC9Q9Y3B6 208 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 NOTCH2Q04721 2471 aa12.39□□□□□ -0.43
TSPAN4-220ENST00000532375 DCTN3O75935 186 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 T-ENOLP0DO92 83 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 CD79BP40259 229 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 CDH12P55289 794 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 CTBP2P56545 445 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 SLC35A1P78382 337 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 LTBQ06643 244 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 CEACAM7Q14002 265 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 KRT72Q14CN4 511 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 FXNQ16595 210 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 CYBRD1Q53TN4 286 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 ALG10BQ5I7T1 473 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 GKAP1Q5VSY0 366 aaPredicted RBP12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 C1orf140Q5VVS0 124 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 ULK3Q6PHR2 472 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 PAQR6Q6TCH4 344 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 TFAP2EQ6VUC0 442 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 WDR88Q6ZMY6 472 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 TMEM99Q8N816 258 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 LINC01560Q8TB33 94 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 RASSF5Q8WWW0 418 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 ZNF775Q96BV0 537 aaPredicted RBP12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 KTI12Q96EK9 354 aaPredicted RBP12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 TMEM27Q9HBJ8 222 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 CRIM1Q9NZV1 1036 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 KLHL9Q9P2J3 617 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 KCNN3Q9UGI6 736 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 TAGLN3Q9UI15 199 aa12.38□□□□□ -0.43
TSPAN4-220ENST00000532375 PDZD2O15018 2839 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 CXCR6O00574 342 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 EIF1BO60739 113 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 PLGP00747 810 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 PNMTP11086 282 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 TNFRSF1BP20333 461 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 IDUAP35475 653 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 CPOXP36551 454 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 KRTAP10-9P60411 292 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 SELENOWP63302 87 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 ENTPD8Q5MY95 495 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 TMEM201Q5SNT2 666 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 ZNF613Q6PF04 617 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 CARM1Q86X55 608 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 KIF18BQ86Y91 864 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 P3H2Q8IVL5 708 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 CCDC197Q8NCU1 140 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 MFSD8Q8NHS3 518 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 VANGL1Q8TAA9 524 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 TAAR8Q969N4 342 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 SLC47A1Q96FL8 570 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 PRSS27Q9BQR3 290 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 ZNF426Q9BUY5 554 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 ALG2Q9H553 416 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 C12orf49Q9H741 205 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 SLC13A4Q9UKG4 626 aa12.37□□□□□ -0.43
TSPAN4-220ENST00000532375 AQP7P3A6NL99 342 aa12.36□□□□□ -0.43
TSPAN4-220ENST00000532375 ELOA3DA6NLF2 546 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms