RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 LGALS13Q9UHV8 139 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 ATP6V1HQ9UI12 483 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 ESPNB1AK53 854 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 KLF11O14901 512 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 TMPRSS2O15393 492 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 NPHS1O60500 1241 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 EIF1BO60739 113 aaKnown RBP9.05□□□□□ -0.96
COPB1-207ENST00000529866 DNAJA2O60884 412 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 PEX11AO75192 247 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 KRT33AO76009 404 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 CSTAP01040 98 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 TFP02787 698 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 MSMBP08118 114 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 FGF4P08620 206 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 NUDT17P0C025 328 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 UBTFL6P0CB48 400 aaPredicted RBP9.05□□□□□ -0.96
COPB1-207ENST00000529866 LAMP1P11279 417 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 CDH2P19022 906 aaPredicted RBP9.05□□□□□ -0.96
COPB1-207ENST00000529866 EPHA1P21709 976 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 NTF4P34130 210 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 HPCAL1P37235 193 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 ASMTP46597 345 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 CLK1P49759 484 aaKnown RBP9.05□□□□□ -0.96
COPB1-207ENST00000529866 OR2B6P58173 313 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 IL1RL1Q01638 556 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 SKP2Q13309 424 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 TP53BP2Q13625 1128 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 HIKESHIQ53FT3 197 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 PDZK1Q5T2W1 519 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 TSPO2Q5TGU0 170 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 OLIG3Q7RTU3 272 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 CCDC103Q8IW40 242 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 KRTCAP2Q8N6L1 136 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 POMGNT2Q8NAT1 580 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 NUP37Q8NFH4 326 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 OR51F2Q8NH61 342 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 ZNF563Q8TA94 476 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 TCP10LQ8TDR4 215 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 MTERF3Q96E29 417 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 ANKRD27Q96NW4 1050 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 ZNF317Q96PQ6 595 aaPredicted RBP9.05□□□□□ -0.96
COPB1-207ENST00000529866 NAA11Q9BSU3 229 aaPredicted RBP9.05□□□□□ -0.96
COPB1-207ENST00000529866 ZNF747Q9BV97 191 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 SUCNR1Q9BXA5 334 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 ZNF442Q9H7R0 627 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 ZDHHC2Q9UIJ5 367 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 MID2Q9UJV3 735 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 FLVCR1Q9Y5Y0 555 aa9.05□□□□□ -0.96
COPB1-207ENST00000529866 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 LYPLA1O75608 230 aaPredicted RBP9.04□□□□□ -0.96
COPB1-207ENST00000529866 C6orf47O95873 294 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 AK1P00568 194 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 SAGP10523 405 aaPredicted RBP9.04□□□□□ -0.96
COPB1-207ENST00000529866 NPR2P20594 1047 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 RPL3P39023 403 aaKnown RBP9.04□□□□□ -0.96
COPB1-207ENST00000529866 ETV4P43268 484 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 CCT3P49368 545 aaKnown RBP9.04□□□□□ -0.96
COPB1-207ENST00000529866 ARFIP2P53365 341 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 SLC35A1P78382 337 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 NAAAQ02083 359 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 ADRM1Q16186 407 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 PDCD2Q16342 344 aaPredicted RBP9.04□□□□□ -0.96
COPB1-207ENST00000529866 C3orf36Q3SXR2 165 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 TBRG1Q3YBR2 411 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 THSD4Q6ZMP0 1018 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 EIF3MQ7L2H7 374 aaKnown RBP9.04□□□□□ -0.96
COPB1-207ENST00000529866 GRINAQ7Z429 371 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 SPATA21Q7Z572 469 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 LRRC17Q8N6Y2 441 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 OR5AK3PQ8NH89 298 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 AENQ8WTP8 325 aaKnown RBP9.04□□□□□ -0.96
COPB1-207ENST00000529866 MRPL24Q96A35 216 aaKnown RBP9.04□□□□□ -0.96
COPB1-207ENST00000529866 TMEM45BQ96B21 275 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 MOAP1Q96BY2 351 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 ZBTB9Q96C00 473 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 BOD1Q96IK1 185 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 ARL5BQ96KC2 179 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 PKNOX2Q96KN3 472 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 LRRC37BQ96QE4 947 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 CCDC106Q9BWC9 280 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 SERHL2Q9H4I8 314 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 LPAR2Q9HBW0 351 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 CTPS2Q9NRF8 586 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 TMEM45AQ9NWC5 275 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 TMEM181Q9P2C4 612 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 PCDHGB4Q9UN71 923 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 TRAPPC4Q9Y296 219 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 TMED5Q9Y3A6 229 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 PCDHGB1Q9Y5G3 927 aa9.04□□□□□ -0.96
COPB1-207ENST00000529866 CENPVL1A0A0U1RR11 272 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 ZNF587BE7ETH6 402 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 ITM2AO43736 263 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 TYROBPO43914 113 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 BCL10O95999 233 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 CHEK2O96017 543 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 PNPP00491 289 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 BPGMP07738 259 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 CECR9P0C854 216 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 GPR6P46095 362 aaPredicted RBP9.03□□□□□ -0.96
COPB1-207ENST00000529866 RPS26P62854 115 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms