RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ARMCX2Q7L311 632 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 NDUFAF7Q7L592 441 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 LINGO2Q7L985 606 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ANKRD33Q7Z3H0 272 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ADGRA1Q86SQ6 560 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC47A2Q86VL8 602 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 FUNDC1Q8IVP5 155 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 BAP18Q8IXM2 172 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 APCDD1Q8J025 514 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM89BQ8N5H3 189 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RNF148Q8N7C7 305 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 C12orf76Q8N812 135 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ANKRD52Q8NB46 1076 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 UBAC2Q8NBM4 344 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2M7Q8NG81 312 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 OR11H7Q8NGC8 314 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2G2Q8NGZ5 317 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PRSS3P2Q8NHM4 247 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TERB2Q8NHR7 220 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 COQ8AQ8NI60 647 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 FIBINQ8TAL6 211 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GPR151Q8TDV0 419 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 DUSP19Q8WTR2 217 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 HIST1H2BAQ96A08 127 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TADA1Q96BN2 335 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ROPN1LQ96C74 230 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CALML4Q96GE6 196 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SMIM8Q96KF7 97 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MSLNLQ96KJ4 702 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 FCRL1Q96LA6 429 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MRGPRX1Q96LB2 322 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SPATA13Q96N96 652 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ALKBH3Q96Q83 286 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TAAR6Q96RI8 345 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TRIB1Q96RU8 372 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MBOAT4Q96T53 435 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PCDHB18PQ96TA0 734 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RNF2Q99496 336 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 VAT1Q99536 393 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MTERF1Q99551 399 aaKnown RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PKMYT1Q99640 499 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 EGFL8Q99944 293 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PIGQQ9BRB3 760 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 C7orf50Q9BRJ6 194 aaKnown RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MXRA8Q9BRK3 442 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SUCNR1Q9BXA5 334 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SNHG12Q9BXW3 62 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RNF26Q9BY78 433 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ACTRT3Q9BYD9 372 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RAB34Q9BZG1 259 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ELOVL4Q9GZR5 314 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TUBA4BQ9H853 241 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF430Q9H8G1 570 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ZMAT3Q9HA38 289 aaKnown RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MID1IP1Q9NPA3 183 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM138Q9NPI0 162 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MKKSQ9NPJ1 570 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CHRAC1Q9NRG0 131 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SMCO4Q9NRQ5 59 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GPR173Q9NS66 373 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ABCB8Q9NUT2 735 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PNPOQ9NVS9 261 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 VNN3Q9NY84 501 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TBC1D29Q9UFV1 150 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SMPXQ9UHP9 88 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ZDHHC2Q9UIJ5 367 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GNG8Q9UK08 70 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 KCND3Q9UK17 655 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CMAHPQ9Y471 501 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PLEKHM1Q9Y4G2 1056 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CDH10Q9Y6N8 788 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SLX4Q8IY92 1834 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 C5P01031 1676 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 DOCK1Q14185 1865 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 FNDC1Q4ZHG4 1894 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ARAP2Q8WZ64 1704 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 LOC100130705A0A1B0GUX0 176 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 A0A1W2PPE3 182 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ERI2A8K979 691 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 BBIP1A8MTZ0 92 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 E9PLN8 166 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 G3V3Q6 166 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 H0YIZ8 118 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CYB561D2O14569 222 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MRASO14807 208 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 RNF13O43567 381 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TCF21O43680 179 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2T1O43869 369 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 DOK2O60496 412 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SRPX2O60687 465 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SCN2BO60939 215 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 NXPH3O95157 252 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SGPL1O95470 568 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CYB5R3P00387 301 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 FGBP02675 491 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MT-ND1P03886 318 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ERCC1P07992 297 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ITGA5P08648 1049 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms