RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 HNRNPCL4P0DMR1 293 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 MTHFD2P13995 350 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 IFNGR1P15260 489 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 CD1DP15813 335 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PGCP20142 388 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 DRD4P21917 467 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 GATA3P23771 443 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PRTN3P24158 256 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 LCN1P31025 176 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 STX2P32856 288 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 MPIP34949 423 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 SLC1A3P43003 542 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PGGT1BP53609 377 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 SEC24CP53992 1094 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 MANFP55145 182 aaKnown RBP4.25□□□□□ -1.73
SDCBP-207ENST00000520168 TAS2R39P59534 338 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PSG6Q00889 435 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 COL7A1Q02388 2944 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 POU3F1Q03052 451 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-207ENST00000520168 TGFBR3Q03167 851 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 CHRNEQ04844 493 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF155Q12901 538 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF460Q14592 562 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 MST1LQ2TV78 715 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 FBXO48Q5FWF7 155 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 REP15Q6BDI9 236 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 GPR139Q6DWJ6 353 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 LRFN4Q6PJG9 635 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 KLHL24Q6TFL4 600 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 IKBIPQ70UQ0 350 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 C1QL2Q7Z5L3 287 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ZER1Q7Z7L7 766 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 SLC7A5P1Q8MH63 180 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 UBE2J2Q8N2K1 259 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 METTL4Q8N3J2 472 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 RNF175Q8N4F7 328 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ZDHHC22Q8N966 263 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 L3MBTL4Q8NA19 623 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 FBXO36Q8NEA4 188 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 OR4M2Q8NGB6 313 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 NANPQ8TBE9 248 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 WDR20Q8TBZ3 569 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ZFP90Q8TF47 636 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 DYDC1Q8WWB3 177 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 CKAP2Q8WWK9 683 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ESAMQ96AP7 390 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 GIMAP5Q96F15 307 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 CNRIP1Q96F85 164 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-207ENST00000520168 WDR89Q96FK6 387 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF681Q96N22 645 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 MUS81Q96NY9 551 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 LRRC37BQ96QE4 947 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PKP2Q99959 881 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 GAL3ST1Q99999 423 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 RHOJQ9H4E5 214 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 OBP2BQ9NPH6 170 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PFDN4Q9NQP4 134 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 CA10Q9NS85 328 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 MED17Q9NVC6 651 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 NMRK1Q9NWW6 199 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ASB6Q9NWX5 421 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PSMC3IPQ9P2W1 217 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-207ENST00000520168 MALT1Q9UDY8 824 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PFDN2Q9UHV9 154 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 PRSS50Q9UI38 385 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 UTS2RQ9UKP6 389 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 ACOT9Q9Y305 439 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 TMED5Q9Y3A6 229 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 TEX264Q9Y6I9 313 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 A0A1W2PQD3 144 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 TMEM120BA0PK00 339 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 C17orf51A8MQB3 221 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 ATP6V1G2-DDX39BF2Z307 99 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 POC1B-GALNT4F8VUJ3 575 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 UBXN8O00124 270 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 SCAMP2O15127 329 aaKnown RBP4.24□□□□□ -1.73
SDCBP-207ENST00000520168 TM9SF1O15321 606 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 SULT1B1O43704 296 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 CYTIPO60759 359 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 NOL3O60936 208 aaKnown RBP4.24□□□□□ -1.73
SDCBP-207ENST00000520168 WISP3O95389 354 aaPredicted RBP4.24□□□□□ -1.73
SDCBP-207ENST00000520168 CLDN9O95484 217 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 HSPA4LO95757 839 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 CRYAAP02489 173 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 OPN1MWP04001 364 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 INHBAP08476 426 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 SNRPAP09012 282 aaKnown RBP4.24□□□□□ -1.73
SDCBP-207ENST00000520168 GSTP1P09211 210 aaKnown RBP4.24□□□□□ -1.73
SDCBP-207ENST00000520168 IFI6P09912 130 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 OPN1MW2P0DN77 364 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 OPN1MW3P0DN78 364 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 HPGDP15428 266 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF3P17036 446 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 ADRA2CP18825 462 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 ZFP36P26651 326 aaKnown RBP4.24□□□□□ -1.73
SDCBP-207ENST00000520168 SLC7A1P30825 629 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 SFTPDP35247 375 aa4.24□□□□□ -1.73
SDCBP-207ENST00000520168 ELK3P41970 407 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms