RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 RBKSQ9H477 322 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZNF702PQ9H963 129 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 ISG20L2Q9H9L3 353 aaKnown RBP3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 RAB20Q9NX57 234 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 KLHL21Q9UJP4 597 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 N6AMT1Q9Y5N5 214 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 HIP1O00291 1037 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 DCTN6O00399 190 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 HSD17B6O14756 317 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 CASP14P31944 242 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 BCL2L1Q07817 233 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 MRPL28Q13084 256 aaKnown RBP3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 GNMTQ14749 295 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 OXA1LQ15070 435 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 PPP1R7Q15435 360 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 DGUOKQ16854 277 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 ISXQ2M1V0 245 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 HSP90AB3PQ58FF7 597 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 GPRC6AQ5T6X5 926 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR52E8Q6IFG1 317 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 C11orf71Q6IPW1 123 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 UQCC3Q6UW78 93 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 TMEM107Q6UX40 140 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 HSDL2Q6YN16 418 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR2L3Q8NG85 312 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 PAGE5Q96GU1 130 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 C12orf42Q96LP6 360 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 KCNA7Q96RP8 456 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 CNN2Q99439 309 aaKnown RBP3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 ZNF184Q99676 751 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 GAL3ST1Q99999 423 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 MAPKAP1Q9BPZ7 522 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 PPA2Q9H2U2 334 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 KLHL28Q9NXS3 571 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 PISDQ9UG56 409 aa3.96□□□□□ -1.78
HMGB1P46-201ENST00000520062 PLEKHH1Q9ULM0 1364 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 A0A1W2PPV9 198 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 LOC110117498-PIK3R3F6TDL0 507 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 STAMBPO95630 424 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 OXSR1O95747 527 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 CST1P01037 141 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 IGHV3-23P01764 117 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 KRT14P02533 472 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 GAPDHP04406 335 aaKnown RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR8U8P0C7N1 319 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 ZNF853P0CG23 659 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 NPR2P20594 1047 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 P2RY4P51582 365 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 BIDP55957 195 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 RIPPLY3P57055 190 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 PLP1P60201 277 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 RPS8P62241 208 aaKnown RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 SCRN3Q0VDG4 424 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR5I1Q13606 314 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 KIAA0040Q15053 153 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 RCN1Q15293 331 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 SAMD4BQ5PRF9 694 aaKnown RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR2G6Q5TZ20 316 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 PRAMEF20Q5VT98 475 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 RNASEKQ6P5S7 137 aaKnown RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 MYPOPQ86VE0 399 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 SPATA4Q8NEY3 305 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 MRAPQ8TCY5 172 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 SLC25A38Q96DW6 304 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 PGLYRP4Q96LB8 373 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 OXGR1Q96P68 337 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 SMIM14Q96QK8 99 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 FMO2Q99518 471 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 RIOK1Q9BRS2 568 aaKnown RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 DEFB126Q9BYW3 111 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 SELENOIQ9C0D9 397 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 NARFLQ9H6Q4 476 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 SUDS3Q9H7L9 328 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 FOLH1BQ9HBA9 442 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 UBQLN1Q9UMX0 589 aaKnown RBP3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 TMED5Q9Y3A6 229 aa3.95□□□□□ -1.78
HMGB1P46-201ENST00000520062 GON4LQ3T8J9 2241 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 IGHV1OR21-1A0A087WYE8 117 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 GFYI3L273 518 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 K7N7A8 449 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 KLHL41O60662 606 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 TMEM50AO95807 157 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 GIG44P09565 113 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 AQP1P29972 269 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 VHLP40337 213 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 BTDP43251 543 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 YAP1P46937 504 aaKnown RBP3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 SLC26A2P50443 739 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 PRRX1P54821 245 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 GBE1Q04446 702 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 TLE4Q04727 773 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 EGFEM1PQ0D2K5 195 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 MICBQ29980 383 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 NSUN5P1Q3KNT7 163 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 PARP15Q460N3 678 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 CARD17Q5XLA6 110 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 UNQ9370/PRO34162Q6UXP9 181 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 ZNF677Q86XU0 584 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 HPS6Q86YV9 775 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 PSTKQ8IV42 348 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms