RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 MEGF11A6BM72 1044 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 TSPAN12O95859 305 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 B3GALT4O96024 378 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 FBXO45P0C2W1 286 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 HNRNPA2B1P22626 353 aaKnown RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 MMP11P24347 488 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 NR0B1P51843 470 aaKnown RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 LTBQ06643 244 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 HMGN3Q15651 99 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 FAM219BQ5XKK7 198 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 DEFB123Q8N688 67 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 DUSP18Q8NEJ0 188 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 LINC01599Q8WXQ3 324 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 MYLIPQ8WY64 445 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 MR1Q95460 341 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF559Q9BR84 538 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 SIRT5Q9NXA8 310 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 NCOR1O75376 2440 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 SPTA1P02549 2419 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 IFNA10P01566 189 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 HEXBP07686 556 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 CBR1P16152 277 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 SGSHP51688 502 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 PLGLB1Q02325 96 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 CSNK1A1LQ8N752 337 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 FBXW5Q969U6 566 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 TRAF4Q9BUZ4 470 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 TBX21Q9UL17 535 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 CLEC4EQ9ULY5 219 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 APC2O95996 2303 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 FEZF1A0PJY2 475 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 KCNJ13O60928 360 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 OR8U9P0C7N5 309 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 CTRB1P17538 263 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 HOXD9P28356 352 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 GAB1Q13480 694 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 GNMTQ14749 295 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 CTRB2Q6GPI1 263 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 PAPD4Q6PIY7 484 aaKnown RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 RTN4RL1Q86UN2 441 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 TP53I13Q8NBR0 393 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 OR8D4Q8NGM9 314 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 ISG20Q96AZ6 181 aaKnown RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 LMAN1LQ9HAT1 526 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM30AQ9NV96 361 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 PRODH2Q9UF12 536 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 MICAL3Q7RTP6 2002 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 LINC01553A4QN01 128 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 HIDE1A8MVS5 230 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 AIPO00170 330 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 IFNA2P01563 188 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 IGFBP1P08833 259 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 FURINP09958 794 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 RNH1P13489 461 aaKnown RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 ANXA7P20073 488 aaKnown RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF425Q6IV72 752 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM81Q6P7N7 255 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 LIX1LQ8IVB5 337 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 FBXL6Q8N531 539 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 STK35Q8TDR2 534 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 SEC22AQ96IW7 307 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 ATF6BQ99941 703 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 SLC6A17Q9H1V8 727 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 PPP4R1LQ9P1A2 415 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 EPHA6Q9UF33 1036 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 NUP205Q92621 2012 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 A0A1B0GV50 99 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 ANTXRLA6NF34 631 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 GABARAPH6UMI1 98 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 SOCS6O14544 535 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 B4GALT3O60512 393 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 AHSA1O95433 338 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 APBB3O95704 486 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 GYPBP06028 91 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 HCKP08631 526 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 RRASP10301 218 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 LIPCP11150 499 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 GP1BBP13224 206 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 SPI1P17947 270 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 ITGB7P26010 798 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 GABRA3P34903 492 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 CRYBB2P43320 205 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 MAP2K6P52564 334 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 HHEXQ03014 270 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 SSX1Q16384 188 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 ENTPD8Q5MY95 495 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 CDH26Q8IXH8 852 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 LRRC25Q8N386 305 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF587Q96SQ5 575 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-211ENST00000513346 STRADBQ9C0K7 418 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 MARCH5Q9NX47 278 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 NME7Q9Y5B8 376 aa10.47□□□□□ -0.73
TCOF1-211ENST00000513346 TRAV20A0A0B4J274 112 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 PHYHO14832 338 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF208O43345 1280 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 MED6O75586 246 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 MMP2P08253 660 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 AMY2BP19961 511 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 CTGFP29279 349 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 HOXA9P31269 272 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms