RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 RAB13P51153 203 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 MAP2K6P52564 334 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 RPL23AP62750 156 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 FAM76BQ5HYJ3 339 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 CTSL3PQ5NE16 218 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 LPCAT3Q6P1A2 487 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ASRGL1Q7L266 308 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 HMGN2P46Q86SG4 172 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 LSM14AQ8ND56 463 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 ST8SIA1Q92185 356 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 KISS1RQ969F8 398 aaPredicted RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 TAAR8Q969N4 342 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 COQ10AQ96MF6 247 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 MACROD1Q9BQ69 325 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 CHST8Q9H2A9 424 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ANKRD19PQ9H560 264 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 POM121BA6NF01 834 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 TMEM202A6NGA9 273 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 FOXO6A8MYZ6 492 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 UBFD1O14562 309 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 SHOXO15266 292 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 MAS1P04201 325 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ARAFP10398 606 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 MAGEA3P43357 314 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ZNF789Q5FWF6 425 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ZNF766Q5HY98 468 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ENTPD8Q5MY95 495 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 Q7L0L9 218 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 TMEM150AQ86TG1 271 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 RDH10Q8IZV5 341 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 LILRB2Q8N423 598 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 CISD2Q8N5K1 135 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 OR5W2Q8NH69 310 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 OR1S1Q8NH92 325 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ZNF300Q96RE9 604 aaPredicted RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 CMSS1Q9BQ75 279 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 C7orf50Q9BRJ6 194 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 BARHL1Q9BZE3 327 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 TSPAN10Q9H1Z9 355 aaPredicted RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 NMNAT1Q9HAN9 279 aaPredicted RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 OLAHQ9NV23 265 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 XPNPEP2O43895 674 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 TYROBPO43914 113 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ZGLP1P0C6A0 271 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ZNF182P17025 639 aaPredicted RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 PRSS3P35030 304 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 PTGS2P35354 604 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 STT3AP46977 705 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 OR8G1Q15617 311 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 SMAD2Q15796 467 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 MRPL2Q5T653 305 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 FAM111BQ6SJ93 734 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 NPSR1Q6W5P4 371 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 FAM57BQ71RH2 274 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 PHTF2Q8N3S3 785 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 SDR9C7Q8NEX9 313 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 HTRA1Q92743 480 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 OCSTAMPQ9BR26 566 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 SORBS1Q9BX66 1292 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 GSTO2Q9H4Y5 243 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 EGLN3Q9H6Z9 239 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 PLCH1Q4KWH8 1693 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 IGHV1OR15-9A0A0B4J2B8 117 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 METTL15A6NJ78 407 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 GABARAPH6UMI1 98 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 M0R1B8 84 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 GABARAPO95166 117 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 F10P00742 488 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 YES1P07947 543 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 CD22P20273 847 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 SNCAP37840 140 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 CX3CR1P49238 355 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 NUBP1P53384 320 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 GPR50Q13585 617 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 RHEBQ15382 184 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ACTBL2Q562R1 376 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 SLC35D2Q76EJ3 337 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 SLC35F3Q8IY50 421 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 PRR18Q8N4B5 295 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 SAMD12Q8N8I0 201 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 GLYATL2Q8WU03 294 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 ZBTB8AQ96BR9 441 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 BARD1Q99728 777 aaKnown RBP3.94□□□□□ -1.78
VCAN-209ENST00000513016 NUDT22Q9BRQ3 303 aa3.94□□□□□ -1.78
VCAN-209ENST00000513016 A6NHS1 94 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 AGAP5A6NIR3 686 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 C21orf140B9A014 251 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 HRO43593 1189 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 GPRIN2O60269 458 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 IL1AP01583 271 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 TK1P04183 234 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 S100PP25815 95 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PTGER4P35408 488 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 BMXP51813 675 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 BIDP55957 195 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 KCNAB2Q13303 367 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 GAB1Q13480 694 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 VASNQ6EMK4 673 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 LCN8Q6JVE9 175 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PGAP1Q75T13 922 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms