RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GGT1P19440 569 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 PRKAR1BP31321 381 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 NCALDP61601 193 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 NKX6-1P78426 367 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-207ENST00000509102 H3F3AP84243 136 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 TAB1Q15750 504 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 OTUD3Q5T2D3 398 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-207ENST00000509102 SHEQ5VZ18 495 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 METTL21CQ5VZV1 264 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 CASP12Q6UXS9 341 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.51■□□□□ 0.23
UBE3D-207ENST00000509102 SERPINA11Q86U17 422 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 CCDC103Q8IW40 242 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 BHLHE22Q8NFJ8 381 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM38AQ9H6F2 299 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 ASB6Q9NWX5 421 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 SLAMF8Q9P0V8 285 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 RNF115Q9Y4L5 304 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 MED13LQ71F56 2210 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 PRRC2AP48634 2157 aaKnown RBP16.5■□□□□ 0.23
UBE3D-207ENST00000509102 ZC3H12DA2A288 527 aaKnown RBP16.5■□□□□ 0.23
UBE3D-207ENST00000509102 CCT8L1PA6NM43 557 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 CD3EP07766 207 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 TROVE2P10155 538 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBE3D-207ENST00000509102 IMPDH2P12268 514 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 GTF2E2P29084 291 aaKnown RBP16.5■□□□□ 0.23
UBE3D-207ENST00000509102 ADAM8P78325 824 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 CEACAM7Q14002 265 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 SCARB2Q14108 478 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 PPA1Q15181 289 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 OR7A5Q15622 319 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 TIMM23BQ5SRD1 257 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 DHDDSQ86SQ9 333 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 MSRB3Q8IXL7 192 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 LRRC75A-AS1Q8N1F1 130 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 TSPEARQ8WU66 669 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 TMUB1Q9BVT8 246 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 SF3B5Q9BWJ5 86 aaKnown RBP16.5■□□□□ 0.23
UBE3D-207ENST00000509102 SELENONQ9NZV5 590 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 UPB1Q9UBR1 384 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 ANGPT4Q9Y264 503 aa16.5■□□□□ 0.23
UBE3D-207ENST00000509102 LIPT2A6NK58 231 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 ELOA3DA6NLF2 546 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-207ENST00000509102 CLOCKO15516 846 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 SASH3O75995 380 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 AHSA1O95433 338 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 IGHV3-9P01782 118 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 PRG2P13727 222 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 GPX2P18283 190 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 COX5AP20674 150 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 LOXP28300 417 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-207ENST00000509102 RIPPLY3P57055 190 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 CYP51A1Q16850 503 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 ELOA3BQ3SY89 546 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 HSP90B2PQ58FF3 399 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 C1orf140Q5VVS0 124 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM225Q6GV28 225 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 HIPK4Q8NE63 616 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 ELOA3Q8NG57 546 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 STK35Q8TDR2 534 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM171Q8WVE6 324 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 CXorf56Q9H5V9 222 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 SLC52A3Q9NQ40 469 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 ADPRHL2Q9NX46 363 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 TAS2R16Q9NYV7 291 aa16.49■□□□□ 0.23
UBE3D-207ENST00000509102 TRBV5-3A0A0A0MS03 114 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 HS3ST1O14792 307 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 TMCC2O75069 709 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 VAMP5O95183 116 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 IGHV1-2P23083 117 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 ADSLP30566 484 aaPredicted RBP16.48■□□□□ 0.23
UBE3D-207ENST00000509102 TGFBR3Q03167 851 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 FAPQ12884 760 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 FOXD4Q12950 439 aaPredicted RBP16.48■□□□□ 0.23
UBE3D-207ENST00000509102 BNIP2Q12982 314 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 OR7E24Q6IFN5 339 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 DHRS4L2Q6PKH6 230 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 C5orf46Q6UWT4 87 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 GPAT4Q86UL3 456 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 C11orf65Q8NCR3 313 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 C3orf49Q96BT1 292 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 TRIM2Q9C040 744 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 PIF1Q9H611 641 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 EVA1AQ9H8M9 152 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 C12orf10Q9HB07 376 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 MALT1Q9UDY8 824 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 FLVCR1Q9Y5Y0 555 aa16.48■□□□□ 0.23
UBE3D-207ENST00000509102 OR5H1A6NKK0 313 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 AQP7P3A6NL99 342 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 FRS3O43559 492 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 RAMP1O60894 148 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 RAD51DO75771 328 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 AKR7A3O95154 331 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 PNMTP11086 282 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 FOSL1P15407 271 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 HOXC12P31275 282 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 RBBP4Q09028 425 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 NFYCQ13952 458 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 SLC17A1Q14916 467 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 RUNDC3AQ59EK9 446 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms