RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 TRIM13O60858 407 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 PDE5AO76074 875 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 CRYAAP02489 173 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 OR12D1P0DN82 309 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 DAOP14920 347 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 PRPS1L1P21108 318 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 IDH2P48735 452 aaKnown RBP13.9□□□□□ -0.18
CXCL1-202ENST00000509101 IDH3GP51553 393 aaPredicted RBP13.9□□□□□ -0.18
CXCL1-202ENST00000509101 TUBA1BP68363 451 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 TUBA4AP68366 448 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 FUT5Q11128 374 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 EFNB3Q15768 340 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 PGS1Q32NB8 556 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 TBRG1Q3YBR2 411 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 C6orf136Q5SQH8 315 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 OTUD3Q5T2D3 398 aaPredicted RBP13.9□□□□□ -0.18
CXCL1-202ENST00000509101 C1QTNF12Q5T7M4 302 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 TNFAIP8L2Q6P589 184 aaPredicted RBP13.9□□□□□ -0.18
CXCL1-202ENST00000509101 FRRS1Q6ZNA5 592 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 TUBA1AQ71U36 451 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 RIMKLAQ8IXN7 391 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 CNPY4Q8N129 248 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 C4orf33Q8N1A6 199 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 LINC01356Q8N9X3 169 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 POMGNT2Q8NAT1 580 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 TMEM45BQ96B21 275 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 C3orf30Q96M34 536 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 ZNF385AQ96PM9 386 aaKnown RBP13.9□□□□□ -0.18
CXCL1-202ENST00000509101 KATNB1Q9BVA0 655 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 TXLNGYQ9BZA5 131 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 RAB1BQ9H0U4 201 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 PLK3Q9H4B4 646 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 SEC61A2Q9H9S3 476 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 PCDHGB4Q9UN71 923 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 MGAM2Q2M2H8 2515 aa13.9□□□□□ -0.18
CXCL1-202ENST00000509101 ZC3H12DA2A288 527 aaKnown RBP13.89□□□□□ -0.19
CXCL1-202ENST00000509101 LILRA1O75019 489 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 SNUPNO95149 360 aaKnown RBP13.89□□□□□ -0.19
CXCL1-202ENST00000509101 VENTXO95231 258 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 LGI1O95970 557 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 FGF4P08620 206 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 TACSTD2P09758 323 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 CECR9P0C854 216 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 GIFP27352 417 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 SLC1A3P43003 542 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 POLR2HP52434 150 aaKnown RBP13.89□□□□□ -0.19
CXCL1-202ENST00000509101 CDH15P55291 814 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 NAAAQ02083 359 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 LGALS3BPQ08380 585 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 CCNIQ14094 377 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 ATAD3BQ5T9A4 648 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 OR4F3Q6IEY1 312 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 PAQR6Q6TCH4 344 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 AAED1Q7RTV5 226 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 ABHD12BQ7Z5M8 362 aaPredicted RBP13.89□□□□□ -0.19
CXCL1-202ENST00000509101 OR9K2Q8NGE7 335 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 OR1K1Q8NGR3 316 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 XAGE5Q8WWM1 108 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 OIT3Q8WWZ8 545 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 RAB8BQ92930 207 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 AURKBQ96GD4 344 aaPredicted RBP13.89□□□□□ -0.19
CXCL1-202ENST00000509101 ALKBH3Q96Q83 286 aaPredicted RBP13.89□□□□□ -0.19
CXCL1-202ENST00000509101 OCEL1Q9H607 264 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 OBP2BQ9NPH6 170 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 EXOSC3Q9NQT5 275 aaKnown RBP13.89□□□□□ -0.19
CXCL1-202ENST00000509101 OSGIN1Q9UJX0 560 aa13.89□□□□□ -0.19
CXCL1-202ENST00000509101 hCG_2039718K7EN88 272 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 ZNF500O60304 480 aaPredicted RBP13.88□□□□□ -0.19
CXCL1-202ENST00000509101 KRT33AO76009 404 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 SHBGP04278 402 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 KRT4P19013 534 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 CALCRP30988 508 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 HTR3AP46098 478 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 UBE2NP61088 152 aaKnown RBP13.88□□□□□ -0.19
CXCL1-202ENST00000509101 TRIP10Q15642 601 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 FAM174BQ3ZCQ3 159 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 GPAT4Q86UL3 456 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 ZCCHC24Q8N2G6 241 aaKnown RBP13.88□□□□□ -0.19
CXCL1-202ENST00000509101 TMEM99Q8N816 258 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 ZIC4Q8N9L1 334 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 SEMA6DQ8NFY4 1073 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 OR4A15Q8NGL6 344 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 MIPOL1Q8TD10 442 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 CNOT9Q92600 299 aaKnown RBP13.88□□□□□ -0.19
CXCL1-202ENST00000509101 HPS1Q92902 700 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 ROPN1LQ96C74 230 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 ZG16BQ96DA0 208 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 MECRQ9BV79 373 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 POLE3Q9NRF9 147 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.88□□□□□ -0.19
CXCL1-202ENST00000509101 TMEM45AQ9NWC5 275 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
CXCL1-202ENST00000509101 ZNF587BE7ETH6 402 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 NR5A2O00482 541 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 ZNF208O43345 1280 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 NPHS1O60500 1241 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 AKR7A3O95154 331 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 AGR2O95994 175 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 ERCC1P07992 297 aaPredicted RBP13.87□□□□□ -0.19
CXCL1-202ENST00000509101 G6PDP11413 515 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms