RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FAPQ12884 760 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 FADDQ13158 208 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 SQLEQ14534 574 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 OTUD3Q5T2D3 398 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 LRIF1Q5T3J3 769 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 GCNT6Q5T4J0 391 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 WBP2NLQ6ICG8 309 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 TMEM99Q8N816 258 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 BBS10Q8TAM1 723 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 MAGEB18Q96M61 343 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 SMR3AQ99954 134 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 NAA11Q9BSU3 229 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 ADAM19Q9H013 955 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 IKZF5Q9H5V7 419 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 ARMC7Q9H6L4 198 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 SLC52A3Q9NQ40 469 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 ADPRHL2Q9NX46 363 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 VAPAQ9P0L0 249 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 TRAPPC4Q9Y296 219 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 RNF115Q9Y4L5 304 aa13.08□□□□□ -0.32
UBE2D3-228ENST00000508974 CIB4A0PJX0 185 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 GPR171O14626 319 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 HS3ST1O14792 307 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 ARHGEF9O43307 516 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 DNPH1O43598 174 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 EIF1BO60739 113 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 PGM3O95394 542 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 CD3EP07766 207 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 GGT1P19440 569 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 AQP1P29972 269 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 FOXG1P55316 489 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 H3F3AP84243 136 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 PDK3Q15120 406 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 PPA1Q15181 289 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 NCMAPQ5T1S8 102 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 FBXW9Q5XUX1 488 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 ADAM5Q6NVV9 412 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 GPAT4Q86UL3 456 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 ZNF433Q8N7K0 673 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 KBTBD8Q8NFY9 601 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 OR52E4Q8NGH9 312 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 TMEM171Q8WVE6 324 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 PIP5K1AQ99755 562 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 TMEM204Q9BSN7 226 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 ESRP2Q9H6T0 727 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 NGBQ9NPG2 151 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 DLL4Q9NR61 685 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 IFT52Q9Y366 437 aa13.07□□□□□ -0.32
UBE2D3-228ENST00000508974 ARID1AO14497 2285 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 A0A0G2JND7 137 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 LIPT2A6NK58 231 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 GPIP06744 558 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 ARAFP10398 606 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 BMP2P12643 396 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 COX5AP20674 150 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 ATP4BP51164 291 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 SLC16A1P53985 500 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 CDK6Q00534 326 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 SF3A3Q12874 501 aaKnown RBP eCLIP13.06□□□□□ -0.322e-8■□□□□ 10.5
UBE2D3-228ENST00000508974 GLIPR1L2Q4G1C9 344 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 SHEQ5VZ18 495 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 SEZ6L2Q6UXD5 910 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 Q71RC1 249 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 YTHDF3Q7Z739 585 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 COMTD1Q86VU5 262 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 LILRB1Q8NHL6 650 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 C3orf49Q96BT1 292 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 MUCL1Q96DR8 90 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 Q96MF0 132 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 TAPBPLQ9BX59 468 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 RSPO3Q9BXY4 272 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 BCL2L10Q9HD36 194 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 ASB6Q9NWX5 421 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 NPAP1Q9NZP6 1156 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 LAMP3Q9UQV4 416 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 SLC9A8Q9Y2E8 581 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 FLVCR1Q9Y5Y0 555 aa13.06□□□□□ -0.32
UBE2D3-228ENST00000508974 ZFHX3Q15911 3703 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 TRBV5-3A0A0A0MS03 114 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 A0A1W2PP18 115 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 DPRXA6NFQ7 191 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 OR5H1A6NKK0 313 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 A8MVM7 634 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 EVPLLA8MZ36 301 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 PTH2RP49190 550 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 SCARB2Q14108 478 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 SLC17A1Q14916 467 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 C1orf140Q5VVS0 124 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 PAQR6Q6TCH4 344 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 LRRC75A-AS1Q8N1F1 130 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 ZNF611Q8N823 705 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 RNF217Q8TC41 542 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 SLC25A36Q96CQ1 311 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 ZNF385AQ96PM9 386 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 C1QTNF6Q9BXI9 259 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 SLC7A10Q9NS82 523 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 UPB1Q9UBR1 384 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms