RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 DMTNQ08495 405 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 FAPQ12884 760 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 SLC17A1Q14916 467 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 PGGHGQ32M88 737 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 RNF220Q5VTB9 566 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 PRAMEF8Q5VWM4 474 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 PRAMEF7Q5VXH5 474 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 ZNF544Q6NX49 715 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 SLC22A25Q6T423 547 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 KLHL24Q6TFL4 600 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 CASP12Q6UXS9 341 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 OLIG3Q7RTU3 272 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 FBXL14Q8N1E6 418 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 PIAS4Q8N2W9 510 aaPredicted RBP11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 OR52P1PQ8NH57 321 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 TEX37Q96LM6 180 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 ZNF317Q96PQ6 595 aaPredicted RBP11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 DHRS9Q9BPW9 319 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 RHNO1Q9BSD3 238 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 REG4Q9BYZ8 158 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 OR11A1Q9GZK7 315 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 SLCO5A1Q9H2Y9 848 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 OBP2BQ9NPH6 170 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 CBLN4Q9NTU7 201 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 FLVCR1Q9Y5Y0 555 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 SLC25A15Q9Y619 301 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 CADP27708 2225 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 FN1P02751 2386 aaKnown RBP11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 DSPPQ9NZW4 1301 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 TMEM72A0PK05 275 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 A8MVM7 634 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 KLF11O14901 512 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 UBDO15205 165 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 TLX2O43763 284 aaPredicted RBP11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 CCNA2P20248 432 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 CD40P25942 277 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 PCSK6P29122 969 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 MPGP29372 298 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 IL12AP29459 219 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 CRATP43155 626 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 DSTNP60981 165 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 IRX1P78414 480 aaPredicted RBP11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 CHRNB3Q05901 458 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 FADDQ13158 208 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 GABRA6Q16445 453 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 OTUD3Q5T2D3 398 aaPredicted RBP11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 CCDC103Q8IW40 242 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 MIER2Q8N344 545 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 BOD1Q96IK1 185 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 INPP5KQ9BT40 448 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 AMBRA1Q9C0C7 1298 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 HEATR1Q9H583 2144 aaKnown RBP11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 WDR55Q9H6Y2 383 aaPredicted RBP11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 TPT1P8Q9HAU6 139 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 SDR39U1Q9NRG7 319 aaPredicted RBP11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 ZANQ9Y493 2812 aa11.97□□□□□ -0.49
CCHCR1-227ENST00000508852 CSPG4Q6UVK1 2322 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 CLDN24A6NM45 220 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 PDLIM1O00151 329 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 AP3D1O14617 1153 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 RAMP1O60894 148 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 BCAS1O75363 584 aaPredicted RBP11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 IGHV3-9P01782 118 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 GSNP06396 782 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 TFPTP0C1Z6 253 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 KITP10721 976 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 IMPDH2P12268 514 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 NCF2P19878 526 aaPredicted RBP11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 TTKP33981 857 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 CDKN1AP38936 164 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 CDKN2CP42773 168 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 POLR2JP52435 117 aaKnown RBP11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 WDR4P57081 412 aaKnown RBP11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 PRPS1P60891 318 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 STX1BP61266 288 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 RAB35Q15286 201 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 TMEM225Q6GV28 225 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 C5orf46Q6UWT4 87 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 MUC15Q8N387 334 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 OR52N5Q8NH56 324 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 PNPT1Q8TCS8 783 aaKnown RBP11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 STK35Q8TDR2 534 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 SPATA9Q9BWV2 254 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 NPAP1Q9NZP6 1156 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 FBXO9Q9UK97 447 aaPredicted RBP11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 RASD1Q9Y272 281 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 PMF1-BGLAPU3KQ54 211 aa11.96□□□□□ -0.49
CCHCR1-227ENST00000508852 PLCE1Q9P212 2302 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 JMJD1CQ15652 2540 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 LIPT2A6NK58 231 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 AQP7P3A6NL99 342 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 INAFM1C9JVW0 142 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 KRT33AO76009 404 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 TGDSO95455 350 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 CD8AP01732 235 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 BCHEP06276 602 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 ITGA5P08648 1049 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 CSF3P09919 207 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms