RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 CYP2S1Q96SQ9 504 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 RIOK1Q9BRS2 568 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 C20orf24Q9BUV8 137 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 PPA2Q9H2U2 334 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 RBKSQ9H477 322 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 REEP4Q9H6H4 257 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 MRPL22Q9NWU5 206 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 ABCD2Q9UBJ2 740 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 B4GALT7Q9UBV7 327 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 WARS2Q9UGM6 360 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 SAMD4AQ9UPU9 718 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 PDE10AQ9Y233 779 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 PLLPQ9Y342 182 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 PLEKHG2Q9H7P9 1386 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PLEKHH1Q9ULM0 1364 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SMIM28A0A1B0GU29 152 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 A0A1B0GUS0 222 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 TCRBV9S1A1TA0A576 114 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 IDSB3KWA1 339 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 B4DXG7 233 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SUPT3HB4E1H0 165 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 UGT1A9O60656 530 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 RAMP3O60896 148 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 ERLIN2O94905 339 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 H6PDO95479 791 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 POLR2MP0CAP2 368 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 GZMAP12544 262 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 ABOP16442 354 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 HNRNPH3P31942 346 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 LEPP41159 167 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 CRYBB2P43320 205 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 RFX3P48380 749 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 ALDH3B2P48448 385 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 GSK3BP49841 420 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 EFNA3P52797 238 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 MRPS11P82912 194 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 CDK16Q00536 496 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 ASPHQ12797 758 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 RUNX3Q13761 415 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 CYLC2Q14093 348 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 LTB4RQ15722 352 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 MICBQ29980 383 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 VPS26BQ4G0F5 336 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SAMD4BQ5PRF9 694 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PVRIGQ6DKI7 326 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 BIVMQ86UB2 503 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SERINC5Q86VE9 423 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 TRIM69Q86WT6 500 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 NUDCD3Q8IVD9 361 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 COMMD1Q8N668 190 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 CD177Q8N6Q3 437 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SDR9C7Q8NEX9 313 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 VN1R17PQ8TDU5 208 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SLC38A4Q969I6 547 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PSMG2Q969U7 264 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 NTNG2Q96CW9 530 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PPP1R16AQ96I34 528 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SEC22AQ96IW7 307 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PLEKHA8Q96JA3 519 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PKNOX2Q96KN3 472 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 GSDMAQ96QA5 445 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 OR5M11Q96RB7 305 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PANX2Q96RD6 677 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PANX1Q96RD7 426 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 CCT8L2Q96SF2 557 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 RNF2Q99496 336 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 BPIFA3Q9BQP9 254 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 TM2D1Q9BX74 207 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 NMUR2Q9GZQ4 415 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 OPN3Q9H1Y3 402 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 GLIPR2Q9H4G4 154 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 VCPKMTQ9H867 229 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 CAB39LQ9H9S4 337 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 FANCEQ9HB96 536 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 TNFRSF19Q9NS68 423 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SAMSN1Q9NSI8 373 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF446Q9NWS9 450 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 THUMPD1Q9NXG2 353 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 ANAPC11Q9NYG5 84 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 NUP50Q9UKX7 468 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 PEX16Q9Y5Y5 336 aa3.14□□□□□ -1.91
TRAPPC13-209ENST00000508304 SMCO2A6NFE2 343 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 DYNC1I1O14576 645 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 PRKAB2O43741 272 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 SEMA4FO95754 770 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 CST1P01037 141 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 MMP1P03956 469 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 LGALS2P05162 132 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 COX5AP20674 150 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 SLC2A5P22732 501 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ADORA2BP29275 332 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 RRM2P31350 389 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 CASQ1P31415 396 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 RFC4P35249 363 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 MAP3K8P41279 467 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 MAGEA9P43362 315 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 XCR1P46094 333 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms