RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SCO2O43819 266 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 HSBP1O75506 76 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 CLDN9O95484 217 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 TSPAN13O95857 204 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 IFNA21P01568 189 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 PPBPP02775 128 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 P04436 131 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 HOXB7P09629 217 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 HIST1H2AGP0C0S8 130 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ANXA3P12429 323 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 BMP4P12644 408 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 PRF1P14222 555 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 KCNE1P15382 129 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 SRD5A1P18405 259 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 IGFBP5P24593 272 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 SSTR2P30874 369 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 KIR2DL2P43627 348 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 SRSF6Q13247 344 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 TFDP1Q14186 410 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ODF4Q2M2E3 257 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 EARS2Q5JPH6 523 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 SPIN3Q5JUX0 258 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 SDHAF4Q5VUM1 108 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 STUMQ69YW2 141 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 C22orf42Q6IC83 251 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 DHRS13Q6UX07 377 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 TPRG1Q6ZUI0 275 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 APRG1Q8IVJ8 170 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 MDGA1Q8NFP4 955 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 HIST1H2ACQ93077 130 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 FBXL8Q96CD0 374 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 FAF2Q96CS3 445 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 MICU1Q9BPX6 476 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 CHRNA10Q9GZZ6 450 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 L2HGDHQ9H9P8 463 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 VCX3AQ9NNX9 186 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 NLE1Q9NVX2 485 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 C1orf123Q9NWV4 160 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 MIOXQ9UGB7 285 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 MLXQ9UH92 298 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ZDHHC2Q9UIJ5 367 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ZNF225Q9UK10 706 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ASB4Q9Y574 426 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 NUBP2Q9Y5Y2 271 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 A3GALT2U3KPV4 340 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 LRP5LA4QPB2 252 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 USP27XA6NNY8 438 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 INPP4BO15327 924 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 KIAA0513O60268 411 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 EIF1BO60739 113 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 SERPINB7O75635 380 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 AP2A1O95782 977 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 IFNA16P05015 189 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 JUNP05412 331 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 SRD5A2P31213 254 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 SERPINB5P36952 375 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 EIF1P41567 113 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 MAGEA12P43365 314 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 EFNB2P52799 333 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 CRYBA4P53673 196 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 RANP62826 216 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 EWSR1Q01844 656 aaKnown RBP eCLIP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 OC90Q02509 493 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 TLE4Q04727 773 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 MESDQ14696 234 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 PSG5Q15238 335 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 GABRA6Q16445 453 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 ZNF385BQ569K4 471 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 FAHD2BQ6P2I3 314 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 FOXR1Q6PIV2 292 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 DNM1P34Q6PK57 102 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 LCLAT1Q6UWP7 414 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 BTNL3Q6UXE8 466 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 HACD2Q6Y1H2 254 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 STOX1Q6ZVD7 989 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 CPEB2Q7Z5Q1 589 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 RCOR2Q8IZ40 523 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 OR9A4Q8NGU2 314 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 FAHD2AQ96GK7 314 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 RNF2Q99496 336 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 ECSITQ9BQ95 431 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 G6PC3Q9BUM1 346 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 DDA1Q9BW61 102 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 BARHL1Q9BZE3 327 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 ANKRD19PQ9H560 264 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 RHOFQ9HBH0 211 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 SPAG4Q9NPE6 437 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 IL1RAPQ9NPH3 570 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 KRCC1Q9NPI7 259 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 ABHD10Q9NUJ1 306 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 KLHL21Q9UJP4 597 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 STYXL1Q9Y6J8 313 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 USH1CQ9Y6N9 552 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 A0A1W2PPC1 479 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 TTC24A2A3L6 582 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 VPS37CA5D8V6 355 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 RFPL4AA6NLU0 287 aa6.77□□□□□ -1.33
PDGFRA-206ENST00000508170 RFPL4AL1F8VTS6 287 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms