RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SRMP19623 302 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 RGS4P49798 205 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 NDUFV1P49821 464 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 CNTNAP1P78357 1384 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 NKX3-2P78367 333 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 DOC2BQ14184 412 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 MPEG1Q2M385 716 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 ITPRIPL2Q3MIP1 535 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 TPTE2P1Q5T6R2 138 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 FAM102AQ5T9C2 384 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM182Q6ZP80 229 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-204ENST00000504131 TOP6BLQ8N6T0 577 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 CYB561A3Q8NBI2 242 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 CLEC1AQ8NC01 280 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 BVESQ8NE79 360 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 OR1L6Q8NGR2 347 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 ALG3Q92685 438 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 LENG9Q96B70 501 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 CDKN2AIPNLQ96HQ2 116 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 AMNQ9BXJ7 453 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 CD163L1Q9NR16 1453 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 TBC1D3KA0A087X1G2 549 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 C4orf47A7E2U8 309 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 FAM87AP0C7U9 286 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 MMP11P24347 488 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 SDHAP31040 664 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 LIPAP38571 399 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 ARL4AP40617 200 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 GPR18Q14330 331 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 PABPC1L2AQ5JQF8 200 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 B3GNTL1Q67FW5 361 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-204ENST00000504131 B3GLCTQ6Y288 498 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 LYSMD3Q7Z3D4 306 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 PDZD3Q86UT5 571 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF709Q8N972 641 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 OR5AR1Q8NGP9 310 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 ASB9Q96DX5 294 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 TASP1Q9H6P5 420 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 OLAHQ9NV23 265 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 TRAPPC2LQ9UL33 140 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 SLC22A13Q9Y226 551 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 STRCQ7RTU9 1775 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 OR52A4PA6NMU1 304 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 FAM166BA8MTA8 275 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 NPIPB8E9PQR5 432 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF264O43296 627 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 REM1O75628 298 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 FAM155BO75949 473 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 LRATO95237 230 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 GBAP04062 536 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 HIST1H2AGP0C0S8 130 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-204ENST00000504131 HIST1H2ADP20671 130 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 RAP1BP61224 184 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 SCAPQ12770 1279 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 CAMK2GQ13555 558 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-204ENST00000504131 BOP1Q14137 746 aaKnown RBP5.83□□□□□ -1.48
CLCN3-204ENST00000504131 SLC35D3Q5M8T2 416 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 CST9LP1Q5W188 147 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 HIST2H2AA3Q6FI13 130 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 C22orf42Q6IC83 251 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 LRP11Q86VZ4 500 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 DCBLD1Q8N8Z6 715 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 ADAMTS15Q8TE58 950 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 HIST1H2AHQ96KK5 128 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 HIST1H2AJQ99878 128 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM184CQ9NVA4 438 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 PLEK2Q9NYT0 353 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 MSRAQ9UJ68 235 aa5.83□□□□□ -1.48
CLCN3-204ENST00000504131 C17orf102A2RUQ5 167 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 GAGE10A6NGK3 116 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 DLX3O60479 287 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 CLDN1O95832 211 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 ATP5J2P56134 94 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 POU2AF1Q16633 256 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 SPANXN3Q5MJ09 141 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 FIGLAQ6QHK4 219 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 YAF2Q8IY57 180 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF34Q8IZ26 560 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 C17orf78Q8N4C9 275 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 VGLL2Q8N8G2 317 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 OR56A4Q8NGH8 313 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 RPL3LQ92901 407 aaKnown RBP5.82□□□□□ -1.48
CLCN3-204ENST00000504131 MRGPRFQ96AM1 343 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 POM121L2Q96KW2 1035 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 SRSF8Q9BRL6 282 aaKnown RBP5.82□□□□□ -1.48
CLCN3-204ENST00000504131 KLHL13Q9P2N7 655 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 TESQ9UGI8 421 aaKnown RBP5.82□□□□□ -1.48
CLCN3-204ENST00000504131 SNX10Q9Y5X0 201 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 SOX21Q9Y651 276 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-204ENST00000504131 MN1Q10571 1320 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-204ENST00000504131 OR5H15A6NDH6 313 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 OR5H1A6NKK0 313 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 KDM4EB2RXH2 506 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-204ENST00000504131 KLRC4-KLRK1H3BQV0 150 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 HSD17B6O14756 317 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 SELENOFO60613 162 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 GJA4P35212 333 aa5.82□□□□□ -1.48
CLCN3-204ENST00000504131 HENMT1Q5T8I9 393 aaKnown RBP5.82□□□□□ -1.48
CLCN3-204ENST00000504131 HSD17B13Q7Z5P4 300 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-204ENST00000504131 GALNT10Q86SR1 603 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms