RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PFDN5Q99471 154 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 ANKRD19PQ9H560 264 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 BOKQ9UMX3 212 aaPredicted RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 ICAM2P13598 275 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 HLA-DMAP28067 261 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 AGAP7PQ5VUJ5 663 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 KIAA0907Q7Z7F0 614 aaPredicted RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 PRR18Q8N4B5 295 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 C22orf15Q8WYQ4 148 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 ELP4Q96EB1 424 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 VN1R3Q9BXE9 311 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 NAA50Q9GZZ1 169 aaKnown RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 DIMT1Q9UNQ2 313 aaKnown RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 NUMBLQ9Y6R0 609 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 CD300LBA8K4G0 201 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 GPX2P18283 190 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 TACR3P29371 465 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 MAT1AQ00266 395 aaKnown RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 OR5M10Q6IEU7 315 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 FAM111BQ6SJ93 734 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 FCRLAQ7L513 359 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 NDUFAF7Q7L592 441 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 OR7G2Q8NG99 324 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 GLIPR2Q9H4G4 154 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 OBP2AQ9NY56 170 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 B3GNT2Q9NY97 397 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 DNAJB11Q9UBS4 358 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 CD300AQ9UGN4 299 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC16A6O15403 523 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 ACPPP15309 386 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 ZNF26P17031 533 aaPredicted RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 POLR2IP36954 125 aaKnown RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 HENMT1Q5T8I9 393 aaKnown RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 CST9Q5W186 159 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 PLPP6Q8IY26 295 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 OR13F1Q8NGS4 319 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 WDR83Q9BRX9 315 aaKnown RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 SAGE1Q9NXZ1 904 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 A6NIN4 97 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 FZD7O75084 574 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 WDPCPO95876 746 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 IFNA10P01566 189 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 DBHP09172 617 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 SIRPAP78324 504 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 TATDN3Q17R31 274 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 HSF5Q4G112 596 aaPredicted RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 C18orf63Q68DL7 685 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 HBMQ6B0K9 141 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC48A1Q6P1K1 146 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 MEX3BQ6ZN04 569 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 NLRP8Q86W28 1048 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 ZNF740Q8NDX6 193 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 OR4M1Q8NGD0 313 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 ALG12Q9BV10 488 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 QRSL1Q9H0R6 528 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 SCRG1O75711 98 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 CHRM4P08173 479 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 ELAVL4P26378 380 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 GPR176Q14439 515 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 RBM39Q14498 530 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 ZNF529Q6P280 563 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 FUNDC1Q8IVP5 155 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 CLDN22Q8N7P3 220 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 TNFRSF13CQ96RJ3 184 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 P2RY12Q9H244 342 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 SIDT1Q9NXL6 827 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 GMPR2Q9P2T1 348 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 RCE1Q9Y256 329 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 MYH9P35579 1960 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 ADAM23O75077 832 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC43A1O75387 559 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 OPN1LWP04000 364 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC35E2P0CK97 266 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 CR2P20023 1033 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 DUSP7Q16829 419 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 AGBL5Q8NDL9 886 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 GAB3Q8WWW8 586 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 RPL3LQ92901 407 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 FOXN4Q96NZ1 517 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 C1GALT1Q9NS00 363 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 TP53TG5Q9Y2B4 290 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 NPPBP16860 134 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 SEC61A1P61619 476 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 RPL23AP62750 156 aaKnown RBP15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 FAM71E1Q6IPT2 247 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 TBPL2Q6SJ96 375 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC43A2Q8N370 569 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 ZNF454Q8N9F8 522 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 BEST4Q8NFU0 473 aa15.36■□□□□ 0.05
PCDHA1-203ENST00000504120 ZNF593O00488 134 aaPredicted RBP15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 OR8G3PP0DMU2 310 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 TNFSF4P23510 183 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 HOXA9P31269 272 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 MANEAQ5SRI9 462 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 IL20RBQ6UXL0 311 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 CD163Q86VB7 1156 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 COMTD1Q86VU5 262 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 TMEFF1Q8IYR6 380 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 ENTHD1Q8IYW4 607 aa15.35■□□□□ 0.05
PCDHA1-203ENST00000504120 RSPRY1Q96DX4 576 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms