RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 URI1O94763 535 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 LGI1O95970 557 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 COL8A2P25067 703 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 ZFP36P26651 326 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 CCT3P49368 545 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 TMEM33P57088 247 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 LMO4P61968 165 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 TUBA1BP68363 451 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 TUBA4AP68366 448 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF141Q15928 474 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 OCLNQ16625 522 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 REP15Q6BDI9 236 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 ACSM5Q6NUN0 579 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 RBMS3Q6XE24 437 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 TUBA1AQ71U36 451 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 EIF3MQ7L2H7 374 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 OR4M2Q8NGB6 313 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 OR56A1Q8NGH5 318 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 BCL2L2Q92843 193 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 MTERF3Q96E29 417 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 SDF2Q99470 211 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 PAFAH2Q99487 392 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 NAPGQ99747 312 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 TMPRSS13Q9BYE2 586 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 MS4A5Q9H3V2 200 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 GSTO2Q9H4Y5 243 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 C1orf109Q9NX04 203 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 CMAHPQ9Y471 501 aa13.63□□□□□ -0.23
PDLIM7-210ENST00000503827 WNK2Q9Y3S1 2297 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF587BE7ETH6 402 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 H3BQF6 201 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 PIP5K1BO14986 540 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 PPIHO43447 177 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 SYNGR3O43761 229 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 IGKV3-15P01624 115 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 GSTA1P08263 222 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 HOXB1P14653 301 aaPredicted RBP13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 SDC1P18827 310 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 CCNA2P20248 432 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 PRPH2P23942 346 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 SPDYE7PQ495Y7 208 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 R3HCC1LQ7Z5L2 792 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 ADGRG3Q86Y34 549 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 CCNYL1Q8N7R7 359 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 CLHC1Q8NHS4 586 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 MAGEE2Q8TD90 523 aaPredicted RBP13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 PMM1Q92871 262 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 DDIT4LQ96D03 193 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 OR7D2Q96RA2 312 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF275Q9NSD4 429 aaPredicted RBP13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 GPATCH2Q9NW75 528 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 REV1Q9UBZ9 1251 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 BAIAP2L1Q9UHR4 511 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 PCDHGB4Q9UN71 923 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 CCL27Q9Y4X3 112 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 CORINQ9Y5Q5 1042 aa13.62□□□□□ -0.23
PDLIM7-210ENST00000503827 A0A096LPE4 126 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 A0A1W2PPZ6 126 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 J3QLI3 93 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 M0R233 179 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 SLC28A1O00337 649 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 MPZL1O95297 269 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 HPXP02790 462 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 ADRA2CP18825 462 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 RYKP34925 604 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 EVX1P49640 407 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 GNG11P61952 73 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 IL13RA1P78552 427 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 SNTB2Q13425 540 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 DAG1Q14118 895 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 OTUD3Q5T2D3 398 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 PAQR6Q6TCH4 344 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 RIBC1Q8N443 379 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 SPATA4Q8NEY3 305 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 OR9K2Q8NGE7 335 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 C22orf15Q8WYQ4 148 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF385AQ96PM9 386 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 SF3B5Q9BWJ5 86 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF416Q9BWM5 594 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 SLITRK2Q9H156 845 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 NINJ2Q9NZG7 142 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 KCNE5Q9UJ90 142 aa13.61□□□□□ -0.23
PDLIM7-210ENST00000503827 IGHV2OR16-5A0A0B4J2B6 119 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 POC1B-GALNT4F8VUJ3 575 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 STX11O75558 287 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 UGT2B17O75795 530 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 PRSS23O95084 383 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 CELA3BP08861 270 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 IMPDH2P12268 514 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 CBR1P16152 277 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 TCN1P20061 433 aaPredicted RBP13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 PRTN3P24158 256 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 PGM1P36871 562 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 HTR3AP46098 478 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 C2orf54Q08AI8 447 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 DCAF12L2Q5VW00 463 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 LCA5Q86VQ0 697 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 ZIC4Q8N9L1 334 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 IL17RDQ8NFM7 739 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 OR5D16Q8NGK9 328 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms