RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 LPAR4Q99677 370 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 CRB3Q9BUF7 120 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 ADGRL4Q9HBW9 690 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 ADAM18Q9Y3Q7 739 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 CDC40O60508 579 aaKnown RBP eCLIP19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 CBFA2T3O75081 653 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 SBK2P0C263 348 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 ASAH2BP0C7U1 165 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 PGCP20142 388 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 RPL4P36578 427 aaKnown RBP19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 EFR3AQ14156 821 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 GXYLT1Q4G148 440 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 DBX2Q6ZNG2 339 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 OR8K3Q8NH51 312 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 DEPDC7Q96QD5 511 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 DDOQ99489 341 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 INPP5EQ9NRR6 644 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 RXFP3Q9NSD7 469 aa19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 TXNL4BQ9NX01 149 aaKnown RBP19.44■□□□□ 0.7
UBE2D3-216ENST00000503742 PCNX3Q9H6A9 2034 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 hCG_2014768A0A024R1R8 64 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 PLD2O14939 933 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 IDH3BO43837 385 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 ZNF883P0CG24 379 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 ZNF28P17035 718 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 ITPKBP27987 946 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 P2RX1P51575 399 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 RPS7P62081 194 aaKnown RBP19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 RPS25P62851 125 aaKnown RBP19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 INAQ16352 499 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 ZNF554Q86TJ5 538 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 LRRC75AQ8NAA5 344 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 SDR9C7Q8NEX9 313 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 MOSPD2Q8NHP6 518 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 ATOH1Q92858 354 aaPredicted RBP19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 NANSQ9NR45 359 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 YARS2Q9Y2Z4 477 aaKnown RBP19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 TRBV11-1A0A0K0K1C0 115 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 SCO2O43819 266 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 AKAP8O43823 692 aaKnown RBP19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 ZNF12P17014 697 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 GABRA5P31644 462 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 SOX6P35712 828 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 RPS19P39019 145 aaKnown RBP19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 SLC26A5P58743 744 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 MC2RQ01718 297 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 CBFBQ13951 182 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 CD200R1LQ6Q8B3 271 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 FAM98AQ8NCA5 519 aaKnown RBP19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 NPEPL1Q8NDH3 523 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 TMEM203Q969S6 136 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 KTI12Q96EK9 354 aaPredicted RBP19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 WDR54Q9H977 334 aa19.43■□□□□ 0.7
UBE2D3-216ENST00000503742 PNMA8CA0A1B0GUJ8 204 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 KHNYNO15037 678 aaKnown RBP19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 GYPBP06028 91 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 GP1BAP07359 652 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 ACP1P24666 158 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 UQCRC1P31930 480 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 MPLP40238 635 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 AQP2P41181 271 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 SLC16A1P53985 500 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 BDH1Q02338 343 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 GALEQ14376 348 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 TCEAL6Q6IPX3 200 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 TMPRSS11AQ6ZMR5 421 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 GPR119Q8TDV5 335 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 TCEAL3Q969E4 200 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 ALG8Q9BVK2 526 aa19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 ISG20L2Q9H9L3 353 aaKnown RBP19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 C19orf25Q9UFG5 118 aaPredicted RBP19.42■□□□□ 0.7
UBE2D3-216ENST00000503742 SLC30A4O14863 429 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 LRRTM2O43300 516 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 GMFGO60234 142 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 CCL4P13236 92 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 MISPQ8IVT2 679 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 ZFP41Q8N8Y5 198 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 THAP3Q8WTV1 239 aaPredicted RBP19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 HGDQ93099 445 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 ABTB1Q969K4 478 aaPredicted RBP19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 TAAR8Q969N4 342 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 C8orf44Q96CB5 159 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 KATNB1Q9BVA0 655 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 C6orf62Q9GZU0 229 aaPredicted RBP19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 RHBDL2Q9NX52 303 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 COL27A1Q8IZC6 1860 aaPredicted RBP19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 DAPL1A0PJW8 107 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 BLOC1S5-TXNDC5H3BN57 136 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 LDOC1O95751 146 aaPredicted RBP19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 GP1BBP13224 206 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 APEHP13798 732 aaKnown RBP19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 NAGAP17050 411 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 CXCR1P25024 350 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 FBXW4P57775 412 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 ERVK-25P63136 954 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 POU4F2Q12837 409 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 FAM122BQ7Z309 247 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 C10orf53Q8N6V4 93 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 OR10H4Q8NGA5 316 aa19.41■□□□□ 0.7
UBE2D3-216ENST00000503742 OR5L2Q8NGL0 311 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms