RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 IDUAP35475 653 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 SF3A3Q12874 501 aaKnown RBP eCLIP14.22□□□□□ -0.136e-9■■■■■ 32.1
NR1H3-227ENST00000498548 FAPQ12884 760 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 GLIPR1L2Q4G1C9 344 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 OTUD3Q5T2D3 398 aaPredicted RBP14.22□□□□□ -0.13
NR1H3-227ENST00000498548 C9orf135Q5VTT2 229 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 FBXW9Q5XUX1 488 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 SEZ6L2Q6UXD5 910 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 C20orf204Q6ZNR8 217 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 COMTD1Q86VU5 262 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 BBS10Q8TAM1 723 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 APH1AQ96BI3 265 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 C3orf49Q96BT1 292 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 PIP5K1AQ99755 562 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 SMR3AQ99954 134 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 POTEKPQ9BYX7 375 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 DLL4Q9NR61 685 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 FLVCR1Q9Y5Y0 555 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 TRBV5-3A0A0A0MS03 114 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 A0A1W2PP18 115 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 CIB4A0PJX0 185 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 LIPT2A6NK58 231 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 CCT8L1PA6NM43 557 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 GPR171O14626 319 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 HS3ST1O14792 307 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 TPST1O60507 370 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 EDF1O60869 148 aaKnown RBP14.21□□□□□ -0.13
NR1H3-227ENST00000498548 CD3EP07766 207 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 SLC16A1P53985 500 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 CDK6Q00534 326 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 SLC17A1Q14916 467 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 PPA1Q15181 289 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 Q5PR19 223 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 SHEQ5VZ18 495 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 CASP12Q6UXS9 341 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 DLEU7Q6UYE1 221 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 ARMC7Q9H6L4 198 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 ADPRHL2Q9NX46 363 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 RNF115Q9Y4L5 304 aa14.21□□□□□ -0.13
NR1H3-227ENST00000498548 ARID1AO14497 2285 aa14.21□□□□□ -0.14
NR1H3-227ENST00000498548 A8MVM7 634 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 EIF1BO60739 113 aaKnown RBP14.2□□□□□ -0.14
NR1H3-227ENST00000498548 GPIP06744 558 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 GGT1P19440 569 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 COX5AP20674 150 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 AQP1P29972 269 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 RIPPLY3P57055 190 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 BSPH1Q075Z2 132 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 SELPLGQ14242 412 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 ZSWIM7Q19AV6 140 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 RUNDC3AQ59EK9 446 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 PRAMEF8Q5VWM4 474 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 PRAMEF7Q5VXH5 474 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 REEP3Q6NUK4 255 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 PAQR6Q6TCH4 344 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 KBTBD8Q8NFY9 601 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 OR52N5Q8NH56 324 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 CPPED1Q9BRF8 314 aaPredicted RBP14.2□□□□□ -0.14
NR1H3-227ENST00000498548 ZNF385DQ9H6B1 395 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 ESRP2Q9H6T0 727 aaKnown RBP14.2□□□□□ -0.14
NR1H3-227ENST00000498548 NGBQ9NPG2 151 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 NPAP1Q9NZP6 1156 aa14.2□□□□□ -0.14
NR1H3-227ENST00000498548 A0A0G2JND7 137 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 EVPLLA8MZ36 301 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 ARHGEF9O43307 516 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 ETS2P15036 469 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 GPX2P18283 190 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 PPIBP23284 216 aaKnown RBP14.19□□□□□ -0.14
NR1H3-227ENST00000498548 PTH2RP49190 550 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 MAP2K6P52564 334 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 SCARB2Q14108 478 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 TIMM23BQ5SRD1 257 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 TSPO2Q5TGU0 170 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 C1orf140Q5VVS0 124 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 ADAM5Q6NVV9 412 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 Q71RC1 249 aaPredicted RBP14.19□□□□□ -0.14
NR1H3-227ENST00000498548 YTHDF3Q7Z739 585 aaKnown RBP14.19□□□□□ -0.14
NR1H3-227ENST00000498548 GPAT4Q86UL3 456 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 RETREG3Q86VR2 466 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 LRRC75A-AS1Q8N1F1 130 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 CIARTQ8N365 385 aaPredicted RBP14.19□□□□□ -0.14
NR1H3-227ENST00000498548 KDM8Q8N371 416 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 ZNF611Q8N823 705 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 ZIC4Q8N9L1 334 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 OR9K2Q8NGE7 335 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 TMEM171Q8WVE6 324 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 IGFBPL1Q8WX77 278 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 SLC25A36Q96CQ1 311 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 MUCL1Q96DR8 90 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 Q96MF0 132 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 ZNF385AQ96PM9 386 aaKnown RBP14.19□□□□□ -0.14
NR1H3-227ENST00000498548 WFDC6Q9BQY6 131 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 TAPBPLQ9BX59 468 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 C1QTNF6Q9BXI9 259 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 SLC7A10Q9NS82 523 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 ASB6Q9NWX5 421 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 UPB1Q9UBR1 384 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 LEF1Q9UJU2 399 aaPredicted RBP14.19□□□□□ -0.14
NR1H3-227ENST00000498548 LAMP3Q9UQV4 416 aa14.19□□□□□ -0.14
NR1H3-227ENST00000498548 NDUFAF1Q9Y375 327 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms