RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 C9orf135Q5VTT2 229 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 KLHL24Q6TFL4 600 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 FRRS1Q6ZNA5 592 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 KIRREL3Q8IZU9 778 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 TRIML2Q8N7C3 387 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 WDR31Q8NA23 367 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 CNOT9Q92600 299 aaKnown RBP10.55□□□□□ -0.72
CNOT4-211ENST00000498534 TESCQ96BS2 214 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 TRNT1Q96Q11 434 aaKnown RBP10.55□□□□□ -0.72
CNOT4-211ENST00000498534 SLC35A5Q9BS91 424 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 SHARPINQ9H0F6 387 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 MANSC1Q9H8J5 431 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 SLC17A5Q9NRA2 495 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 SLC7A10Q9NS82 523 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 TMEM160Q9NX00 188 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 PRDM4Q9UKN5 801 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 FLVCR1Q9Y5Y0 555 aa10.55□□□□□ -0.72
CNOT4-211ENST00000498534 A0A096LNT2 108 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 CFAP73A6NFT4 308 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 CLDN24A6NM45 220 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 ITM2AO43736 263 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 SCN2BO60939 215 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 BCAS1O75363 584 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-211ENST00000498534 KRT33AO76009 404 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 SERPINE1P05121 402 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 CREB1P16220 341 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 CXCR1P25024 350 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 TACR3P29371 465 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 MPGP29372 298 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 RPL14P50914 215 aaKnown RBP10.54□□□□□ -0.72
CNOT4-211ENST00000498534 CLNS1AP54105 237 aaKnown RBP10.54□□□□□ -0.72
CNOT4-211ENST00000498534 FOXG1P55316 489 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-211ENST00000498534 ABCE1P61221 599 aaKnown RBP10.54□□□□□ -0.72
CNOT4-211ENST00000498534 PHC1P78364 1004 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 TXNL4AP83876 142 aaKnown RBP10.54□□□□□ -0.72
CNOT4-211ENST00000498534 GUCA2AQ02747 115 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 SLC17A1Q14916 467 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 GSTA3Q16772 222 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 TSPO2Q5TGU0 170 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 PAQR6Q6TCH4 344 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 B3GLCTQ6Y288 498 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 ABHD12BQ7Z5M8 362 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-211ENST00000498534 HMGN2P46Q86SG4 172 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 ZNF781Q8N8C0 355 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 POMGNT2Q8NAT1 580 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 C10orf105Q8TEF2 133 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 KCNS3Q9BQ31 491 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 AMBRA1Q9C0C7 1298 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 OSGIN1Q9UJX0 560 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 RAP2CQ9Y3L5 183 aa10.54□□□□□ -0.72
CNOT4-211ENST00000498534 TMEM72A0PK05 275 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 CCDC154A6NI56 674 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 AGAP5A6NIR3 686 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 PDLIM1O00151 329 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 HMGN4O00479 90 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 FAAHO00519 579 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 AP3D1O14617 1153 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 BIRC5O15392 142 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 TYROBPO43914 113 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 LMX1BO60663 402 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 GPIP06744 558 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 DBIP07108 87 aaKnown RBP10.53□□□□□ -0.72
CNOT4-211ENST00000498534 NR2F1P10589 423 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 IMPDH2P12268 514 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 LBPP18428 481 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 CDH2P19022 906 aaPredicted RBP10.53□□□□□ -0.72
CNOT4-211ENST00000498534 PAX7P23759 505 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 ETV4P43268 484 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 GZMKP49863 264 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 PDLIM4P50479 330 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 CHI3L2Q15782 390 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 FAM174BQ3ZCQ3 159 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 SPANXN4Q5MJ08 99 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 OTUD3Q5T2D3 398 aaPredicted RBP10.53□□□□□ -0.72
CNOT4-211ENST00000498534 TMEM225Q6GV28 225 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 LRRC74BQ6ZQY2 392 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 ZNF621Q6ZSS3 439 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 AAED1Q7RTV5 226 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 RNF130Q86XS8 419 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 ZNF440Q8IYI8 595 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 LRRC34Q8IZ02 419 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 WDR60Q8WVS4 1066 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 NANOS1Q8WY41 292 aaKnown RBP10.53□□□□□ -0.72
CNOT4-211ENST00000498534 FBXO17Q96EF6 278 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 PANX1Q96RD7 426 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 SF3B5Q9BWJ5 86 aaKnown RBP10.53□□□□□ -0.72
CNOT4-211ENST00000498534 PIF1Q9H611 641 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 TMEM45AQ9NWC5 275 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 BTNL2Q9UIR0 455 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 MOKQ9UQ07 419 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 FKBP7Q9Y680 259 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 YLPM1P49750 1951 aaKnown RBP10.53□□□□□ -0.72
CNOT4-211ENST00000498534 CUBNO60494 3623 aa10.53□□□□□ -0.72
CNOT4-211ENST00000498534 PRAMEF27A3QJZ7 478 aa10.52□□□□□ -0.73
CNOT4-211ENST00000498534 VSTM5A8MXK1 200 aa10.52□□□□□ -0.73
CNOT4-211ENST00000498534 E9PBE3 544 aa10.52□□□□□ -0.73
CNOT4-211ENST00000498534 NDUFS8O00217 210 aa10.52□□□□□ -0.73
CNOT4-211ENST00000498534 KLF11O14901 512 aa10.52□□□□□ -0.73
CNOT4-211ENST00000498534 IGHV4-31P0DP07 118 aa10.52□□□□□ -0.73
CNOT4-211ENST00000498534 THBS2P35442 1172 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms