RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 NUP37Q8NFH4 326 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 OR1K1Q8NGR3 316 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 OR2T11Q8NH01 316 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 SFXN5Q8TD22 340 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 OR5P2Q8WZ92 322 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 MRPL24Q96A35 216 aaKnown RBP10.1□□□□□ -0.79
CDK9-205ENST00000498339 MOAP1Q96BY2 351 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 AURKBQ96GD4 344 aaPredicted RBP10.1□□□□□ -0.79
CDK9-205ENST00000498339 SUCNR1Q9BXA5 334 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 ZNF442Q9H7R0 627 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 ZNF696Q9H7X3 374 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 SEC61A2Q9H9S3 476 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 ATAD3AQ9NVI7 634 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 GPATCH2Q9NW75 528 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 SLC35A3Q9Y2D2 325 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 TMED5Q9Y3A6 229 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 CCL27Q9Y4X3 112 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 LOC105371242A0A075B767 164 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 A0A096LPE4 126 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 A0A1W2PPZ6 126 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 OR6C65A6NJZ3 312 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 TMEM114B3SHH9 223 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 NR5A2O00482 541 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 UGT2B17O75795 530 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 AK1P00568 194 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 TFP02787 698 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 LINC00032P0C843 101 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 MATN1P21941 496 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 FKBP2P26885 142 aaKnown RBP10.09□□□□□ -0.79
CDK9-205ENST00000498339 CLK1P49759 484 aaKnown RBP10.09□□□□□ -0.79
CDK9-205ENST00000498339 NAA20P61599 178 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 NPRL3Q12980 569 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 SNTB2Q13425 540 aaKnown RBP10.09□□□□□ -0.79
CDK9-205ENST00000498339 SLC17A1Q14916 467 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 ZNF141Q15928 474 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 LSM12Q3MHD2 195 aaKnown RBP10.09□□□□□ -0.79
CDK9-205ENST00000498339 ZNF311Q5JNZ3 666 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 ZYG11AQ6WRX3 759 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 TIFABQ6ZNK6 161 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 ARFGAP2Q8N6H7 521 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 OR9K2Q8NGE7 335 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 TMEM45BQ96B21 275 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 SLC35G5Q96KT7 338 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 FCRL1Q96LA6 429 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 FMO2Q99518 471 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 DOK1Q99704 481 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 SLC6A7Q99884 636 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 TREM2Q9NZC2 230 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 KCNE5Q9UJ90 142 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 PCDHGB4Q9UN71 923 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 TRAPPC4Q9Y296 219 aa10.09□□□□□ -0.79
CDK9-205ENST00000498339 CMYA5Q8N3K9 4069 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 TMED7-TICAM2A0A0A6YYA0 188 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 TMEM72A0PK05 275 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 DUXAA6NLW8 204 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 AZIN1O14977 448 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 LSM1O15116 133 aaKnown RBP10.08□□□□□ -0.8
CDK9-205ENST00000498339 FCMRO60667 390 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 DNAJA2O60884 412 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 BCL10O95999 233 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 CELA3BP08861 270 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 LAMP1P11279 417 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 IMPDH2P12268 514 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 BCKDHAP12694 445 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 PAX7P23759 505 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 MAPK1P28482 360 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 PGM1P36871 562 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 HTR3AP46098 478 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 IDH2P48735 452 aaKnown RBP10.08□□□□□ -0.8
CDK9-205ENST00000498339 KHKP50053 298 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 HPCAP84074 193 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 H3F3AP84243 136 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 HGFACQ04756 655 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 KRT80Q6KB66 452 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 EMBQ6PCB8 327 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 PAQR6Q6TCH4 344 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 HMGN2P46Q86SG4 172 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 ADGRG3Q86Y34 549 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 RELL1Q8IUW5 271 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 IFT81Q8WYA0 676 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 ZNF385AQ96PM9 386 aaKnown RBP10.08□□□□□ -0.8
CDK9-205ENST00000498339 ZNF747Q9BV97 191 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 TSPYL1Q9H0U9 437 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 SERHL2Q9H4I8 314 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 MOV10Q9HCE1 1003 aaKnown RBP10.08□□□□□ -0.8
CDK9-205ENST00000498339 EXD2Q9NVH0 621 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 ATP6V1HQ9UI12 483 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 TMED7Q9Y3B3 224 aa10.08□□□□□ -0.8
CDK9-205ENST00000498339 ARPC4-TTLL3A0A0A6YYG9 625 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 TRAV20A0A0B4J274 112 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 RNF103-CHMP3A0A140T963 221 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 G3V2L1 256 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 M0R233 179 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 PPIHO43447 177 aaKnown RBP10.07□□□□□ -0.8
CDK9-205ENST00000498339 SCN2BO60939 215 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 BCAS1O75363 584 aaPredicted RBP10.07□□□□□ -0.8
CDK9-205ENST00000498339 AKR7A3O95154 331 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 GPIP06744 558 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 GAAP10253 952 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms