RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 MAP3K8P41279 467 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 QARSP47897 775 aaKnown RBP1.59□□□□□ -2.15
RBM39-242ENST00000498280 EFNB2P52799 333 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 GBX2P52951 348 aaPredicted RBP1.59□□□□□ -2.15
RBM39-242ENST00000498280 PKNOX1P55347 436 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 RAP1BP61224 184 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 TIMM10P62072 90 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 SELENOTP62341 195 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 KLRC3Q07444 240 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 KLRB1Q12918 225 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 IL24Q13007 206 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 DAZ2Q13117 558 aaKnown RBP1.59□□□□□ -2.15
RBM39-242ENST00000498280 CHIT1Q13231 466 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 CARD16Q5EG05 197 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 DMRTC1Q5HYR2 192 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 PAGE3Q5JUK9 113 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 C1orf220Q5T0J3 134 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 PDZK1Q5T2W1 519 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 OR4F3Q6IEY1 312 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 RFLNAQ6ZTI6 216 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 PGAP1Q75T13 922 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 PPP1R42Q7Z4L9 355 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 CCDC50Q8IVM0 306 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 RDH10Q8IZV5 341 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 C6orf223Q8N319 242 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 ARL6IP6Q8N6S5 226 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 DCAF4L2Q8NA75 395 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 C20orf203Q8NBC4 194 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 MFSD9Q8NBP5 474 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 OR4K14Q8NGD5 310 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 NEIL3Q8TAT5 605 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 MAIP1Q8WWC4 291 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 HTR3CQ8WXA8 447 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 EFHD2Q96C19 240 aaPredicted RBP1.59□□□□□ -2.15
RBM39-242ENST00000498280 TIMD4Q96H15 378 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 SLC38A2Q96QD8 506 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 RNF2Q99496 336 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 NPAS2Q99743 824 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 CRACR2AQ9BSW2 395 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 NAT9Q9BTE0 207 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 VCX2Q9H322 139 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 RBKSQ9H477 322 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 RNF167Q9H6Y7 350 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 SUDS3Q9H7L9 328 aaPredicted RBP1.59□□□□□ -2.15
RBM39-242ENST00000498280 FOLH1BQ9HBA9 442 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 POLE4Q9NR33 117 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 DAZ3Q9NR90 486 aaKnown RBP1.59□□□□□ -2.15
RBM39-242ENST00000498280 CLEC4AQ9UMR7 237 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 PRPF19Q9UMS4 504 aaKnown RBP1.59□□□□□ -2.15
RBM39-242ENST00000498280 NEU3Q9UQ49 428 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 TRAF3IP3Q9Y228 551 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 SLCO1B1Q9Y6L6 691 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 CDH10Q9Y6N8 788 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 V9GY05 133 aa1.59□□□□□ -2.15
RBM39-242ENST00000498280 MEGF6O75095 1541 aa1.59□□□□□ -2.16
RBM39-242ENST00000498280 PLEKHG1Q9ULL1 1385 aa1.59□□□□□ -2.16
RBM39-242ENST00000498280 PLEKHH1Q9ULM0 1364 aa1.59□□□□□ -2.16
RBM39-242ENST00000498280 ARID1AO14497 2285 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 TRAV26-1A0A087WT03 109 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 C15orf38-AP3S2A0A0A6YYH1 394 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 WI2-2373I1.2A0A1W2PRP0 233 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 TCRBV9S1A1TA0A576 114 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 A8MUA0 341 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 HIP1O00291 1037 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 POLR2DO15514 142 aaKnown RBP1.58□□□□□ -2.16
RBM39-242ENST00000498280 ZNF208O43345 1280 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 PRKAB2O43741 272 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 RAMP3O60896 148 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 NPIPB7O75200 414 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 HSMCR30P0CW71 290 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 ZNF17P17021 662 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 HTR1EP28566 365 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 GNA11P29992 359 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 CTRLP40313 264 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 RPL13AP40429 203 aaKnown RBP1.58□□□□□ -2.16
RBM39-242ENST00000498280 GRIA1P42261 906 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 GSSP48637 474 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 WNT4P56705 351 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 NUP107P57740 925 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 PRPS1P60891 318 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 ACTR1AP61163 376 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 FGL1Q08830 312 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 ZNF763Q0D2J5 394 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 PLD1Q13393 1074 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 GPM6BQ13491 265 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 RIPK1Q13546 671 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 ARFRP1Q13795 201 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 VGLL4Q14135 290 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 NSDHLQ15738 373 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 DUSP7Q16829 419 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 EXOC3L2Q2M3D2 409 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 SFT2D3Q587I9 215 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 C1orf100Q5SVJ3 147 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 TIGD3Q6B0B8 471 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 OR52E8Q6IFG1 317 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 C11orf71Q6IPW1 123 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 CASC1Q6TDU7 716 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 UQCC3Q6UW78 93 aa1.58□□□□□ -2.16
RBM39-242ENST00000498280 Q6ZPB1 254 aaPredicted RBP1.58□□□□□ -2.16
RBM39-242ENST00000498280 RGS9BPQ6ZS82 235 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms