RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CCDC103Q8IW40 242 aa16.33■□□□□ 0.2
PRKCB-209ENST00000498058 ZNF100Q8IYN0 542 aa16.33■□□□□ 0.2
PRKCB-209ENST00000498058 ROPN1LQ96C74 230 aa16.33■□□□□ 0.2
PRKCB-209ENST00000498058 USB1Q9BQ65 265 aaKnown RBP16.33■□□□□ 0.2
PRKCB-209ENST00000498058 B3GALT5Q9Y2C3 310 aa16.33■□□□□ 0.2
PRKCB-209ENST00000498058 WDR45Q9Y484 360 aa16.33■□□□□ 0.2
PRKCB-209ENST00000498058 OR5H1A6NKK0 313 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 BBIP1A8MTZ0 92 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 E7EQL1 145 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 AP3D1O14617 1153 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 RAD51DO75771 328 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 TFPIP10646 304 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 GGT1P19440 569 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 UQCRC2P22695 453 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 PRDX6P30041 224 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 CDH11P55287 796 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 CHRNEQ04844 493 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 DMTNQ08495 405 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 CYLC2Q14093 348 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-209ENST00000498058 PDK3Q15120 406 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 ETFDHQ16134 617 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 B3GLCTQ6Y288 498 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 RP9Q8TA86 221 aaKnown RBP16.32■□□□□ 0.2
PRKCB-209ENST00000498058 TMEM234Q8WY98 164 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 CNOT9Q92600 299 aaKnown RBP16.32■□□□□ 0.2
PRKCB-209ENST00000498058 ITCHQ96J02 903 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 SERINC1Q9NRX5 453 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 EXD2Q9NVH0 621 aa16.32■□□□□ 0.2
PRKCB-209ENST00000498058 LEF1Q9UJU2 399 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-209ENST00000498058 HEATR1Q9H583 2144 aaKnown RBP16.31■□□□□ 0.2
PRKCB-209ENST00000498058 A0A096LNT2 108 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 GUSBP08236 651 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 CCNA2P20248 432 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 APOBEC1P41238 236 aaKnown RBP16.31■□□□□ 0.2
PRKCB-209ENST00000498058 CSNK2A1P68400 391 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-209ENST00000498058 MMEL1Q495T6 779 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 FBXW9Q5XUX1 488 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 C11orf71Q6IPW1 123 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 CXXC5Q7LFL8 322 aaKnown RBP16.31■□□□□ 0.2
PRKCB-209ENST00000498058 TRPM8Q7Z2W7 1104 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 FUNDC1Q8IVP5 155 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 OR52N5Q8NH56 324 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 SLC25A43Q8WUT9 341 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-209ENST00000498058 MUCL1Q96DR8 90 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 GRIP2Q9C0E4 1043 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 CHRNA9Q9UGM1 479 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 BTNL2Q9UIR0 455 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 NDUFAF1Q9Y375 327 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 SLC25A15Q9Y619 301 aa16.31■□□□□ 0.2
PRKCB-209ENST00000498058 HMGN4O00479 90 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 GPRIN2O60269 458 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 PMS2P2O95744 297 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 ITGA5P08648 1049 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 COX4I1P13073 169 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 MNAT1P51948 309 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 KCNJ10P78508 379 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
PRKCB-209ENST00000498058 KRT72Q14CN4 511 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 COQ5Q5HYK3 327 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 GRINAQ7Z429 371 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 SNX32Q86XE0 403 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 TRIML2Q8N7C3 387 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 ANKFN1Q8N957 763 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 PCYOX1LQ8NBM8 494 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 OR52E4Q8NGH9 312 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 ZNF563Q8TA94 476 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 HTRA1Q92743 480 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 VPS33AQ96AX1 596 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 NEURL3Q96EH8 262 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 CCDC115Q96NT0 180 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 POLE3Q9NRF9 147 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 SLC35A3Q9Y2D2 325 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 NOSIPQ9Y314 301 aaKnown RBP16.3■□□□□ 0.2
PRKCB-209ENST00000498058 FBN3Q75N90 2809 aa16.3■□□□□ 0.2
PRKCB-209ENST00000498058 IGHV4-30-2A0A087WSY4 118 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 TMEM72A0PK05 275 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 PDLIM1O00151 329 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 CD5LO43866 347 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 SSX4O60224 188 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 CHRM4P08173 479 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 IMPDH2P12268 514 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 IDH2P48735 452 aaKnown RBP16.29■□□□□ 0.2
PRKCB-209ENST00000498058 ZNF83P51522 516 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 SLC16A1P53985 500 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 H3F3AP84243 136 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 GABRA6Q16445 453 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 SYPL1Q16563 259 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 P2RY8Q86VZ1 359 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 UBE2J2Q8N2K1 259 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
PRKCB-209ENST00000498058 FITM2Q8N6M3 262 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 WDR31Q8NA23 367 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 APH1AQ96BI3 265 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 PANX1Q96RD7 426 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 SLC35A5Q9BS91 424 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 C1QTNF6Q9BXI9 259 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 SLC38A1Q9H2H9 487 aa16.29■□□□□ 0.2
PRKCB-209ENST00000498058 LOC100653049A0A140TA62 436 aa16.28■□□□□ 0.2
PRKCB-209ENST00000498058 ZC3H12DA2A288 527 aaKnown RBP16.28■□□□□ 0.2
PRKCB-209ENST00000498058 RFXANKO14593 260 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms