RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 GADL1Q6ZQY3 521 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 RNF165Q6ZSG1 346 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SHFQ7M4L6 423 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CENPVQ7Z7K6 275 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 AMIGO2Q86SJ2 522 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TMPRSS6Q8IU80 811 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ZC3H3Q8IXZ2 948 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 DAW1Q8N136 415 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 GTPBP8Q8N3Z3 284 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ZCCHC9Q8N567 271 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OR5L2Q8NGL0 311 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OR9A4Q8NGU2 314 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OR8U1Q8NH10 309 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OR4C6Q8NH72 309 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TERB2Q8NHR7 220 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MAFAQ8NHW3 353 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 LNX1Q8TBB1 728 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ZFP90Q8TF47 636 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 APH1BQ8WW43 257 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CYGBQ8WWM9 190 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SORCS1Q8WY21 1168 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MAGOHBQ96A72 148 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TM4SF18Q96CE8 201 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TLCD1Q96CP7 247 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SFRP2Q96HF1 295 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MS4A14Q96JA4 679 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SORCS2Q96PQ0 1159 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PANX3Q96QZ0 392 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 IL12RB2Q99665 862 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 GPA33Q99795 319 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ATG101Q9BSB4 218 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PLK3Q9H4B4 646 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 GBA2Q9HCG7 927 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FSCN3Q9NQT6 498 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM161AQ9NX61 479 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 VNN3Q9NY84 501 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 COPS7AQ9UBW8 275 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 RNF150Q9ULK6 438 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF490Q9ULM2 529 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC45A2Q9UMX9 530 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ANGPT4Q9Y264 503 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FBXO7Q9Y3I1 522 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 RBM7Q9Y580 266 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TSSC4Q9Y5U2 329 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ARL5AQ9Y689 179 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CEP152O94986 1710 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 KIF14Q15058 1648 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CDK13Q14004 1512 aaKnown RBP2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 FGD6Q6ZV73 1430 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TRAV26-1A0A087WT03 109 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 LOC102723996A0A087X1L8 192 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TRBV11-1A0A0K0K1C0 115 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TBC1D3BA6NDS4 549 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 YDJCA8MPS7 323 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 ANKRD66B4E2M5 251 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 C9J4A7 227 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 M0QXV9 152 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CLIC1O00299 241 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 PDXKO00764 312 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 COPEO14579 308 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 UBDO15205 165 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 RAD51CO43502 376 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 NRP2O60462 931 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 SELENOFO60613 162 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CA11O75493 328 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 UPK3AO75631 287 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CER1O95813 267 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 C6orf47O95873 294 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TRUB2O95900 331 aaKnown RBP2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 FTH1P02794 183 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 NR3C1P04150 777 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 SERPIND1P05546 499 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 OR10J4P0C629 311 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TSPAN19P0C672 248 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 SPP1P10451 314 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 FOLR2P14207 255 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TPH1P17752 444 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TSPAN8P19075 237 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TBXA2RP21731 343 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 ACVR1BP36896 505 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC6A12P48065 614 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 GLUD2P49448 558 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB5CP51148 216 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TDGF1P3P51864 188 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TMBIM6P55061 237 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CDC42EP1Q00587 391 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 PPP1R8Q12972 351 aaKnown RBP2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 GPR17Q13304 367 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 VAMP3Q15836 100 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CYP1B1Q16678 543 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 PARP15Q460N3 678 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CBWD5Q5RIA9 395 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 GPRC6AQ5T6X5 926 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 OR2G6Q5TZ20 316 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TBC1D3GQ6DHY5 549 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 FCRLAQ7L513 359 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC16A9Q7RTY1 509 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 KCNMB4Q86W47 210 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 TRAPPC5Q8IUR0 188 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 LRRC75A-AS1Q8N1F1 130 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms