RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 OR1L4Q8NGR5 311 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 OR13F1Q8NGS4 319 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 OR9A4Q8NGU2 314 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 LILRB4Q8NHJ6 448 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 AENQ8WTP8 325 aaKnown RBP2.82□□□□□ -1.96
CLK1-214ENST00000496205 MAIP1Q8WWC4 291 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 EFHD2Q96C19 240 aaPredicted RBP2.82□□□□□ -1.96
CLK1-214ENST00000496205 SDSLQ96GA7 329 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 C20orf24Q9BUV8 137 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 DUSP16Q9BY84 665 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 NARFLQ9H6Q4 476 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 NT5MQ9NPB1 228 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 TIGARQ9NQ88 270 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 C20orf96Q9NUD7 363 aaPredicted RBP2.82□□□□□ -1.96
CLK1-214ENST00000496205 ELOVL2Q9NXB9 296 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 POLDIP2Q9Y2S7 368 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 PHLPP2Q6ZVD8 1323 aa2.82□□□□□ -1.96
CLK1-214ENST00000496205 RPAP1Q9BWH6 1393 aaPredicted RBP2.82□□□□□ -1.96
CLK1-214ENST00000496205 A0A1W2PPE3 182 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 GABRR3A8MPY1 467 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 G3V3Y1 287 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 HAS3O00219 553 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 PRKAB2O43741 272 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 DFNA5O60443 496 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 OR2F2O95006 317 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 HPP00738 406 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 CA1P00915 261 aaPredicted RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 HBQ1P09105 142 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 SNRPCP09234 159 aaKnown RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 PCMT1P22061 227 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 PLP1P60201 277 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 RAB11AP62491 216 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 CXCL6P80162 114 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 ENPEPQ07075 957 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 RAB11BQ15907 218 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 MICBQ29980 383 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 MICAQ29983 383 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 HNRNPA1L2Q32P51 320 aaKnown RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 GLYR1Q49A26 553 aaPredicted RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 SBK1Q52WX2 424 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 BEX5Q5H9J7 111 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 ACSM5Q6NUN0 579 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 TMEM53Q6P2H8 277 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 COMTD1Q86VU5 262 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 GABRG1Q8N1C3 465 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 CLEC4FQ8N1N0 589 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 CSGALNACT2Q8N6G5 542 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 ALLCQ8N6M5 410 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 ZSCAN4Q8NAM6 433 aaPredicted RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 OR9A1PQ8NGU1 263 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 TYMSOSQ8TAI1 123 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 IL1F10Q8WWZ1 152 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 OR1E3Q8WZA6 343 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 TM4SF19Q96DZ7 209 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 NUS1Q96E22 293 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 ZBED6CLQ96FA7 236 aaPredicted RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 PANX1Q96RD7 426 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 DPH7Q9BTV6 452 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 SPATA16Q9BXB7 569 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 ANKRD60Q9BZ19 345 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 SLITRK2Q9H156 845 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 CYP3A43Q9HB55 503 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 MIEF1Q9NQG6 463 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 PRR34Q9NV39 138 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 PDP1Q9P0J1 537 aaPredicted RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 STOX2Q9P2F5 926 aaPredicted RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 TBC1D24Q9ULP9 559 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 PACSIN2Q9UNF0 486 aaPredicted RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 N6AMT1Q9Y5N5 214 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 GMPPBQ9Y5P6 360 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 PEX16Q9Y5Y5 336 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 BZW2Q9Y6E2 419 aaKnown RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 FRMPD4Q14CM0 1322 aa2.81□□□□□ -1.96
CLK1-214ENST00000496205 CENPJQ9HC77 1338 aaPredicted RBP2.81□□□□□ -1.96
CLK1-214ENST00000496205 HCFC1P51610 2035 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 IGHV3-35A0A0C4DH35 117 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 OR2AG2A6NM03 316 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 EFCAB7A8K855 629 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 FAM220BPB1ANY3 271 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 PSMD11O00231 422 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 LSM1O15116 133 aaKnown RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 SCRG1O75711 98 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 GJB5O95377 273 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 ERCC1P07992 297 aaPredicted RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 STAG3L2P0CL84 134 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 ETS2P15036 469 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 SRMP19623 302 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 EIF2S2P20042 333 aaKnown RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 FASP25445 335 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 RRM2P31350 389 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 CDH5P33151 784 aaPredicted RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 HPCAL1P37235 193 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 SPAM1P38567 509 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 P2RY1P47900 373 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 CSNK1EP49674 416 aaKnown RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 DUSP3P51452 185 aaPredicted RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 CCNG1P51959 295 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 ATP1B3P54709 279 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 OTUD4Q01804 1114 aaKnown RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 PAX5Q02548 391 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms