RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 HIST1H2ABP04908 130 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 LYNP07948 512 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 IGFBP1P08833 259 aaPredicted RBP9.97□□□□□ -0.81
PKP4-215ENST00000494945 ASAH2BP0C7U1 165 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 SLC6A6P31641 620 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 CLK1P49759 484 aaKnown RBP9.97□□□□□ -0.81
PKP4-215ENST00000494945 RPS4XP62701 263 aaKnown RBP9.97□□□□□ -0.81
PKP4-215ENST00000494945 MYBPC1Q00872 1141 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 CD47Q08722 323 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 FHL1Q13642 323 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 MFSD13AQ14CX5 517 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 MAD2L1BPQ15013 274 aaPredicted RBP9.97□□□□□ -0.81
PKP4-215ENST00000494945 RBM48Q5RL73 367 aaKnown RBP9.97□□□□□ -0.81
PKP4-215ENST00000494945 FAM69AQ5T7M9 428 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 TMEM236Q5W0B7 351 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 SLC25A25Q6KCM7 469 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 C3orf33Q6P1S2 294 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 HIST3H2AQ7L7L0 130 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 CCDC71Q8IV32 467 aaPredicted RBP9.97□□□□□ -0.81
PKP4-215ENST00000494945 SPACA3Q8IXA5 215 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 ENTHD1Q8IYW4 607 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 C10orf53Q8N6V4 93 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 TMEM178AQ8NBL3 297 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 OR2T33Q8NG76 320 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 TRUB1Q8WWH5 349 aaKnown RBP9.97□□□□□ -0.81
PKP4-215ENST00000494945 HDAC2Q92769 488 aaKnown RBP9.97□□□□□ -0.81
PKP4-215ENST00000494945 HIST1H2ACQ93077 130 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 TAAR8Q969N4 342 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 SCMH1Q96GD3 660 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 SAMD8Q96LT4 415 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 SLC38A2Q96QD8 506 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 NPAS1Q99742 590 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 TSSK6Q9BXA6 273 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 NDEL1Q9GZM8 345 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 UBQLN3Q9H347 655 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 DEPPQ9NTK1 212 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 B4GALT7Q9UBV7 327 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 BAIAP2Q9UQB8 552 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 MYRFQ9Y2G1 1151 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 HIF3AQ9Y2N7 669 aa9.97□□□□□ -0.81
PKP4-215ENST00000494945 ARHGAP21Q5T5U3 1957 aa9.96□□□□□ -0.81
PKP4-215ENST00000494945 TRAV27A0A087WT01 109 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 PINLYPA6NC86 204 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 ZIC3O60481 467 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 NDUFB2O95178 105 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 WISP1O95388 367 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 HMGN1P05114 100 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 TSPAN19P0C672 248 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 GRK5P34947 590 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 RPS5P46782 204 aaKnown RBP9.96□□□□□ -0.82
PKP4-215ENST00000494945 TNFSF10P50591 281 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 FXYD6P3P58550 94 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 PRPS1P60891 318 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 GPR85P60893 370 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 CXCR4P61073 352 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 SNRPGP62308 76 aaKnown RBP9.96□□□□□ -0.82
PKP4-215ENST00000494945 LTBQ06643 244 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 FOXO1Q12778 655 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 CDK5R2Q13319 367 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 TOP3AQ13472 1001 aaPredicted RBP9.96□□□□□ -0.82
PKP4-215ENST00000494945 CTU2Q2VPK5 515 aaKnown RBP9.96□□□□□ -0.82
PKP4-215ENST00000494945 PGGHGQ32M88 737 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 KCTD21Q4G0X4 260 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 C6orf141Q5SZD1 244 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 ACSM5Q6NUN0 579 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 PTCHD4Q6ZW05 846 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 MAMDC2Q7Z304 686 aaPredicted RBP9.96□□□□□ -0.82
PKP4-215ENST00000494945 SULF2Q8IWU5 870 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 ZNF786Q8N393 782 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 LRRC17Q8N6Y2 441 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 OR8J1Q8NGP2 316 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 OR51A7Q8NH64 312 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 MFSD8Q8NHS3 518 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 RHOXF1Q8NHV9 184 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 MOGAT1Q96PD6 335 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 TNFRSF13CQ96RJ3 184 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 SMAD5Q99717 465 aaKnown RBP9.96□□□□□ -0.82
PKP4-215ENST00000494945 PIGQQ9BRB3 760 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 PTDSS2Q9BVG9 487 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 POLDIP3Q9BY77 421 aaKnown RBP9.96□□□□□ -0.82
PKP4-215ENST00000494945 OR2B2Q9GZK3 357 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.96□□□□□ -0.82
PKP4-215ENST00000494945 ZNF696Q9H7X3 374 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 MCCC2Q9HCC0 563 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 ZNF226Q9NYT6 803 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 RNF6Q9Y252 685 aa9.96□□□□□ -0.82
PKP4-215ENST00000494945 CACNA1AO00555 2505 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 ANKRD11Q6UB99 2663 aaPredicted RBP9.95□□□□□ -0.82
PKP4-215ENST00000494945 OR2M5A3KFT3 312 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 GJE1A6NN92 205 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 FTCDNL1E5RQL4 147 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 LRRN3E7EW58 273 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 BHLHE40O14503 412 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 EFNA2O43921 213 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 FZD7O75084 574 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 CCDC159P0C7I6 412 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 TFPIP10646 304 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 GABRB1P18505 474 aa9.95□□□□□ -0.82
PKP4-215ENST00000494945 IL11P20809 199 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms