RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CRISP3P54108 245 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 COPZ1P61923 177 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 RPS4XP62701 263 aaKnown RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 SLC35A1P78382 337 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 TXNL4AP83876 142 aaKnown RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 H3F3AP84243 136 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 HOXC5Q00444 222 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 PDK3Q15120 406 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 OR7A5Q15622 319 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 ZNF672Q499Z4 452 aaPredicted RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 TIMM23BQ5SRD1 257 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 AGBL2Q5U5Z8 902 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 ABLIM2Q6H8Q1 611 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 SEZ6L2Q6UXD5 910 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 TMEM99Q8N816 258 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 PIGXQ8TBF5 258 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 LRRC8CQ8TDW0 803 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 MAL2Q969L2 176 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 FBXW5Q969U6 566 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 APH1AQ96BI3 265 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 POTEKPQ9BYX7 375 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 PAIP1Q9H074 479 aaKnown RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 CXorf56Q9H5V9 222 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 ZNF701Q9NV72 531 aaPredicted RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 ASB6Q9NWX5 421 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 NPAP1Q9NZP6 1156 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 SLAMF8Q9P0V8 285 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 UPB1Q9UBR1 384 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 ZNF232Q9UNY5 417 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 CHST2Q9Y4C5 530 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 MAGED1Q9Y5V3 778 aaPredicted RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 CSPG4Q6UVK1 2322 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 CUBNO60494 3623 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 PLCE1Q9P212 2302 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 A0A0G2JPF8 293 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 A0A1W2PP18 115 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 FAM234BA2RU67 622 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 TMEM247A6NEH6 219 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 OR5H1A6NKK0 313 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 HNRNPCL2B2RXH8 293 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 HNRNPCL3B7ZW38 293 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 GPR171O14626 319 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 ABCD4O14678 606 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 KLF11O14901 512 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 POLR3GO15318 223 aaPredicted RBP8.45□□□□□ -1.06
MSH5-218ENST00000494646 ZNF208O43345 1280 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 FRS3O43559 492 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 EIF1BO60739 113 aaKnown RBP8.45□□□□□ -1.06
MSH5-218ENST00000494646 HNRNPCL1O60812 293 aaKnown RBP8.45□□□□□ -1.06
MSH5-218ENST00000494646 NDUFS7O75251 213 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 HEXAP06865 529 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 HNRNPCL4P0DMR1 293 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 UQCRBP14927 111 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 NCF2P19878 526 aaPredicted RBP8.45□□□□□ -1.06
MSH5-218ENST00000494646 COX5AP20674 150 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 IDUAP35475 653 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 IDH3AP50213 366 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 ZNF83P51522 516 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 TNK1Q13470 666 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 LARS2Q15031 903 aaKnown RBP8.45□□□□□ -1.06
MSH5-218ENST00000494646 RGNQ15493 299 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 GABRA6Q16445 453 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 LIN52Q52LA3 116 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 ZNF311Q5JNZ3 666 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 OTUD3Q5T2D3 398 aaPredicted RBP8.45□□□□□ -1.06
MSH5-218ENST00000494646 TSPO2Q5TGU0 170 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 WBP2NLQ6ICG8 309 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 CASP12Q6UXS9 341 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 SERPINA11Q86U17 422 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 GPAT4Q86UL3 456 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 FUNDC1Q8IVP5 155 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 KDM8Q8N371 416 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 MAPK1IP1LQ8NDC0 245 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 GTPBP3Q969Y2 492 aaKnown RBP8.45□□□□□ -1.06
MSH5-218ENST00000494646 COX4I2Q96KJ9 171 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 MUS81Q96NY9 551 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 PRR14Q9BWN1 585 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 PIF1Q9H611 641 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 TCF7L2Q9NQB0 619 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 SLC7A10Q9NS82 523 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 CALML5Q9NZT1 146 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 CCDC167Q9P0B6 97 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 ZNF443Q9Y2A4 671 aaPredicted RBP8.45□□□□□ -1.06
MSH5-218ENST00000494646 FLVCR1Q9Y5Y0 555 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 ABCA2Q9BZC7 2435 aa8.45□□□□□ -1.06
MSH5-218ENST00000494646 CR1P17927 2039 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 LIPT2A6NK58 231 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 A8MVM7 634 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 SHISA9B4DS77 424 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 C5orf58C9J3I9 102 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 M0R1B8 84 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 OVOL3O00110 214 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 NR5A2O00482 541 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 FAAHO00519 579 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 DNPH1O43598 174 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 CD8AP01732 235 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 GPIP06744 558 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 ITGA5P08648 1049 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 PAX1P15863 534 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 458.9 ms