RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 AP1ARQ63HQ0 302 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 C6orf120Q7Z4R8 191 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 C10orf107Q8IVU9 208 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 ARFGAP2Q8N6H7 521 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 SEMA6DQ8NFY4 1073 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 OR4F15Q8NGB8 312 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 SGMS2Q8NHU3 365 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 ZNF317Q96PQ6 595 aaPredicted RBP15.36■□□□□ 0.05
NUP50-218ENST00000493456 DUSP26Q9BV47 211 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 GATA5Q9BWX5 397 aaPredicted RBP15.36■□□□□ 0.05
NUP50-218ENST00000493456 PIF1Q9H611 641 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 TMEM45AQ9NWC5 275 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 WDR45Q9Y484 360 aa15.36■□□□□ 0.05
NUP50-218ENST00000493456 TMED7-TICAM2A0A0A6YYA0 188 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 KLF11O14901 512 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 PEX11AO75192 247 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 CDH2P19022 906 aaPredicted RBP15.35■□□□□ 0.05
NUP50-218ENST00000493456 COMPP49747 757 aaPredicted RBP15.35■□□□□ 0.05
NUP50-218ENST00000493456 NAAAQ02083 359 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 UGT3A2Q3SY77 523 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 TBRG1Q3YBR2 411 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 XKR7Q5GH72 579 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 ATAD3BQ5T9A4 648 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 TYW3Q6IPR3 259 aaKnown RBP15.35■□□□□ 0.05
NUP50-218ENST00000493456 VHLLQ6RSH7 139 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 DEF8Q6ZN54 512 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 RIMKLAQ8IXN7 391 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 KRTCAP2Q8N6L1 136 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 NUP37Q8NFH4 326 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 MIPOL1Q8TD10 442 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 SNX18Q96RF0 628 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 C1orf50Q9BV19 199 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 SF3B5Q9BWJ5 86 aaKnown RBP15.35■□□□□ 0.05
NUP50-218ENST00000493456 SAP130Q9H0E3 1048 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 OCEL1Q9H607 264 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 CRNNQ9UBG3 495 aaPredicted RBP15.35■□□□□ 0.05
NUP50-218ENST00000493456 TMED7Q9Y3B3 224 aa15.35■□□□□ 0.05
NUP50-218ENST00000493456 RNF103-CHMP3A0A140T963 221 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 TMEM233B4DJY2 109 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 COPEO14579 308 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 TRIM13O60858 407 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 BCAS1O75363 584 aaPredicted RBP15.34■□□□□ 0.05
NUP50-218ENST00000493456 IMPDH2P12268 514 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 CCNA2P20248 432 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 POLR2HP52434 150 aaKnown RBP15.34■□□□□ 0.05
NUP50-218ENST00000493456 UBE2NP61088 152 aaKnown RBP15.34■□□□□ 0.05
NUP50-218ENST00000493456 KCNJ10P78508 379 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 PCLAFQ15004 111 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 FAM174BQ3ZCQ3 159 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 RINLQ6ZS11 566 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 OLIG3Q7RTU3 272 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 AAED1Q7RTV5 226 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 ZNF786Q8N393 782 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 C17orf53Q8N3J3 647 aaPredicted RBP15.34■□□□□ 0.05
NUP50-218ENST00000493456 FNDC5Q8NAU1 212 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 MNS1Q8NEH6 495 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 OR9K2Q8NGE7 335 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 OR1K1Q8NGR3 316 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 OR51I1Q9H343 314 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 ZNF442Q9H7R0 627 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.34■□□□□ 0.05
NUP50-218ENST00000493456 GIMAP2Q9UG22 337 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 PKD1L1Q8TDX9 2849 aa15.34■□□□□ 0.05
NUP50-218ENST00000493456 NUP214P35658 2090 aaPredicted RBP15.33■□□□□ 0.04
NUP50-218ENST00000493456 ARPC4-TTLL3A0A0A6YYG9 625 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 TMEM72A0PK05 275 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 VSTM5A8MXK1 200 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 ZNF587BE7ETH6 402 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 KRT33AO76009 404 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 VENTXO95231 258 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 CECR9P0C854 216 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 IDH2P48735 452 aaKnown RBP15.33■□□□□ 0.04
NUP50-218ENST00000493456 KHKP50053 298 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 ACTG1P63261 375 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 RIN1Q13671 783 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 OTUD3Q5T2D3 398 aaPredicted RBP15.33■□□□□ 0.04
NUP50-218ENST00000493456 IL23RQ5VWK5 629 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 ANKRD16Q6P6B7 361 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 FRRS1Q6ZNA5 592 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 FAM169BQ8N8A8 192 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 ZIC4Q8N9L1 334 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 MAGEE2Q8TD90 523 aaPredicted RBP15.33■□□□□ 0.04
NUP50-218ENST00000493456 WDR60Q8WVS4 1066 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 AURKBQ96GD4 344 aaPredicted RBP15.33■□□□□ 0.04
NUP50-218ENST00000493456 OSGIN1Q9UJX0 560 aa15.33■□□□□ 0.04
NUP50-218ENST00000493456 OR6C65A6NJZ3 312 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 B4DSR2 109 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 hCG_2039718K7EN88 272 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 NPHS1O60500 1241 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 IGLV1-44P01699 117 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 GPIP06744 558 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 CHRNGP07510 517 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 HPCAP84074 193 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 C6orf136Q5SQH8 315 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 GLCCI1Q86VQ1 547 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 CMIPQ8IY22 773 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 XAGE5Q8WWM1 108 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 ROPN1LQ96C74 230 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 ANKRD27Q96NW4 1050 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 ZNF385AQ96PM9 386 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms