RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 MGAT4BQ9UQ53 548 aa16.76■□□□□ 0.27
MCF2L-230ENST00000491028 TRAPPC4Q9Y296 219 aa16.76■□□□□ 0.27
MCF2L-230ENST00000491028 TTLL8A6PVC2 850 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 FZD7O75084 574 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 PMS2P2O95744 297 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 ADAP00813 363 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 CBLP22681 906 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 RPS5P46782 204 aaKnown RBP16.75■□□□□ 0.27
MCF2L-230ENST00000491028 OMPP47874 163 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 STARP49675 285 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 CLDN18P56856 261 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 LSM11P83369 360 aaKnown RBP eCLIP16.75■□□□□ 0.27
MCF2L-230ENST00000491028 NFATC3Q12968 1075 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 MYBPHQ13203 477 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 TRIP10Q15642 601 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 ZNF74Q16587 644 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 CTU2Q2VPK5 515 aaKnown RBP16.75■□□□□ 0.27
MCF2L-230ENST00000491028 TMPRSS11FQ6ZWK6 438 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 STK32CQ86UX6 486 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 PM20D2Q8IYS1 436 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 AQP11Q8NBQ7 271 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 GNPDA2Q8TDQ7 276 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 LIPHQ8WWY8 451 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 DNAJC9Q8WXX5 260 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 MIB2Q96AX9 1013 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 EME1Q96AY2 570 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 ADGRG7Q96K78 797 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 TIMP4Q99727 224 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 CIB1Q99828 191 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 TAPBPLQ9BX59 468 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 PRDM14Q9GZV8 571 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 COQ10BQ9H8M1 238 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 FKRPQ9H9S5 495 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 ASF1BQ9NVP2 202 aa16.75■□□□□ 0.27
MCF2L-230ENST00000491028 PAQR5Q9NXK6 330 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-230ENST00000491028 TLN1Q9Y490 2541 aaKnown RBP16.74■□□□□ 0.27
MCF2L-230ENST00000491028 A0A0J9YW62 118 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 A0A1B0GTH9 108 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 EIF1AYO14602 144 aaKnown RBP16.74■□□□□ 0.27
MCF2L-230ENST00000491028 BCKDKO14874 412 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 SEC14L5O43304 696 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 DNPH1O43598 174 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 OR7A10O76100 309 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 BGLAPP02818 100 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 IMPDH2P12268 514 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 FPR3P25089 353 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 CLDN20P56880 219 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 RPS3AP61247 264 aaKnown RBP16.74■□□□□ 0.27
MCF2L-230ENST00000491028 CSNK2A1P68400 391 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-230ENST00000491028 PRR30Q53SZ7 412 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-230ENST00000491028 C1QL3Q5VWW1 255 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 TMPPEQ6ZT21 453 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 PRICKLE2Q7Z3G6 844 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 SLC46A3Q7Z3Q1 461 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 ZER1Q7Z7L7 766 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 UBQLNLQ8IYU4 475 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 HS3ST5Q8IZT8 346 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 OR2V1Q8NHB1 315 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 TAAR8Q969N4 342 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 FAM46AQ96IP4 442 aaKnown RBP16.74■□□□□ 0.27
MCF2L-230ENST00000491028 DGCR6LQ9BY27 220 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 C8orf4Q9NR00 106 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 KIF17Q9P2E2 1029 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 ZNF229Q9UJW7 825 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 CORINQ9Y5Q5 1042 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 BOD1L1Q8NFC6 3051 aa16.74■□□□□ 0.27
MCF2L-230ENST00000491028 A0A1W2PNR3 127 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 LIPT2A6NK58 231 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 FTCDNL1E5RQL4 147 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 SULT2B1O00204 365 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 TNFSF11O14788 317 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 KLF4O43474 513 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 CH25HO95992 272 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 GASTP01350 101 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 OPN1LWP04000 364 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 GSTM3P21266 225 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 GTF2E2P29084 291 aaKnown RBP16.73■□□□□ 0.27
MCF2L-230ENST00000491028 GSSP48637 474 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 SLC9A3P48764 834 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 DIO1P49895 249 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 TSPAN31Q12999 210 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 OTUD3Q5T2D3 398 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-230ENST00000491028 WLSQ5T9L3 541 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 OGFRL1Q5TC84 451 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-230ENST00000491028 HBMQ6B0K9 141 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 FAHD1Q6P587 224 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 MAMDC2Q7Z304 686 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-230ENST00000491028 C10orf53Q8N6V4 93 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 ATG16L2Q8NAA4 619 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 WDYHV1Q96HA8 205 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 FEVQ99581 238 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 RBM4BQ9BQ04 359 aaKnown RBP16.73■□□□□ 0.27
MCF2L-230ENST00000491028 RBM4Q9BWF3 364 aaKnown RBP16.73■□□□□ 0.27
MCF2L-230ENST00000491028 RASSF4Q9H2L5 321 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 ZNF556Q9HAH1 456 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 TIGARQ9NQ88 270 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 NANSQ9NR45 359 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 ALKBH4Q9NXW9 302 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 USE1Q9NZ43 259 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 MAGED1Q9Y5V3 778 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms