RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TMEM247A6NEH6 219 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 COL6A5A8TX70 2615 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 FAAHO00519 579 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 HDAC3O15379 428 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 GPIP06744 558 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 KITP10721 976 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 BMP4P12644 408 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 EPHA3P29320 983 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 CDKN2CP42773 168 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 EPS8Q12929 822 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 RAB35Q15286 201 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 GABRA6Q16445 453 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 GSTA3Q16772 222 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 PAQR6Q6TCH4 344 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 KLHL24Q6TFL4 600 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 CLEC2AQ6UVW9 174 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 MUC15Q8N387 334 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 MUS81Q96NY9 551 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 WDR55Q9H6Y2 383 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-216ENST00000490796 FKRPQ9H9S5 495 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 THAP1Q9NVV9 213 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 DCTN4Q9UJW0 460 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 AMDHD2Q9Y303 409 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 FLVCR1Q9Y5Y0 555 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 ATP23Q9Y6H3 246 aa17.34■□□□□ 0.37
SREBF1-216ENST00000490796 E7EQL1 145 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 SLCO1B7G3V0H7 640 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 TLX2O43763 284 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-216ENST00000490796 KRT33AO76009 404 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 C1QCP02747 245 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 IL6P05231 212 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 IMPDH2P12268 514 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 IL12AP29459 219 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 CRATP43155 626 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 H3F3AP84243 136 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 LIN52Q52LA3 116 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 COX20Q5RI15 118 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 OTUD3Q5T2D3 398 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-216ENST00000490796 ATG16L1Q676U5 607 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 CADM2Q8N3J6 435 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 C17orf78Q8N4C9 275 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 OR52P1PQ8NH57 321 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 MGARPQ8TDB4 240 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 MDFIQ99750 246 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 TAPBPLQ9BX59 468 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 GPR45Q9Y5Y3 372 aa17.33■□□□□ 0.36
SREBF1-216ENST00000490796 HEATR1Q9H583 2144 aaKnown RBP17.33■□□□□ 0.36
SREBF1-216ENST00000490796 DNHD1Q96M86 4753 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 RTTNQ86VV8 2226 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 FAM234BA2RU67 622 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 SLC22A3O75751 556 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 ITGA5P08648 1049 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 IDO1P14902 403 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 NCF2P19878 526 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-216ENST00000490796 NTF4P34130 210 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 CRISP3P54108 245 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 DSCR9P59020 149 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 PLAURQ03405 335 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 KRTAP1-1Q07627 177 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 SPOCK1Q08629 439 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 CEACAM7Q14002 265 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 SLC17A1Q14916 467 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 OR7A5Q15622 319 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 AAED1Q7RTV5 226 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 ABHD12BQ7Z5M8 362 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-216ENST00000490796 GPAT4Q86UL3 456 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 C1orf162Q8NEQ5 155 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-216ENST00000490796 ARMC7Q9H6L4 198 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 RMND5AQ9H871 391 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 SLC17A5Q9NRA2 495 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 SLC7A10Q9NS82 523 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 ADAM21Q9UKJ8 722 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 PRDM4Q9UKN5 801 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 ZNF232Q9UNY5 417 aa17.32■□□□□ 0.36
SREBF1-216ENST00000490796 CHD3Q12873 2000 aaKnown RBP17.31■□□□□ 0.36
SREBF1-216ENST00000490796 ZC3H12DA2A288 527 aaKnown RBP17.31■□□□□ 0.36
SREBF1-216ENST00000490796 CD5LO43866 347 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 WNT11O96014 354 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 THBS1P07996 1170 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 GKN3PP0CG01 181 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 CDH2P19022 906 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-216ENST00000490796 RPS4Y1P22090 263 aaKnown RBP17.31■□□□□ 0.36
SREBF1-216ENST00000490796 MPGP29372 298 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 FOXG1P55316 489 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-216ENST00000490796 PRPS1P60891 318 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 IRX1P78414 480 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-216ENST00000490796 CHRNB3Q05901 458 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 LARS2Q15031 903 aaKnown RBP17.31■□□□□ 0.36
SREBF1-216ENST00000490796 ZSWIM7Q19AV6 140 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 TNFAIP8L3Q5GJ75 292 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 TSPO2Q5TGU0 170 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 TMEM225Q6GV28 225 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 WBP2NLQ6ICG8 309 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 ZNF544Q6NX49 715 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 POMGNT2Q8NAT1 580 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 SF3B5Q9BWJ5 86 aaKnown RBP17.31■□□□□ 0.36
SREBF1-216ENST00000490796 ADAM19Q9H013 955 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 RLIMQ9NVW2 624 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 NKIRAS1Q9NYS0 192 aa17.31■□□□□ 0.36
SREBF1-216ENST00000490796 TMEM120BA0PK00 339 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms