RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MYEF2Q9P2K5 600 aaKnown RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 UPB1Q9UBR1 384 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 PURGQ9UJV8 347 aaKnown RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 MTO1Q9Y2Z2 717 aaKnown RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 WIPI2Q9Y4P8 454 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 FLVCR1Q9Y5Y0 555 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 DNAH10Q8IVF4 4471 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 ARPC4-TTLL3A0A0A6YYG9 625 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 OR6C65A6NJZ3 312 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 VSTM5A8MXK1 200 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 SRRM5B3KS81 715 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 H0YL77 283 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 K7EIL1 84 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 SULT2B1O00204 365 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 NR5A2O00482 541 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 OR7A17O14581 309 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 TRAF3IP2O43734 574 aaPredicted RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 KCNK2O95069 426 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 JUNP05412 331 aaKnown RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 CDH2P19022 906 aaPredicted RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 PAX7P23759 505 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 MPIP34949 423 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 ALDH3B1P43353 468 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 MTNR1AP48039 350 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 P2RX1P51575 399 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 SUMO3P55854 103 aaPredicted RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 CSNK2A1P68400 391 aaPredicted RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 H3F3AP84243 136 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 MGAT5Q09328 741 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 ZNF154Q13106 437 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 TRAF3Q13114 568 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 GTF2H2Q13888 395 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 PDCD1Q15116 288 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 REP15Q6BDI9 236 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 GTF2H2CQ6P1K8 395 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 R3HCC1LQ7Z5L2 792 aaKnown RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 LRP11Q86VZ4 500 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 CCDC103Q8IW40 242 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 PPIL6Q8IXY8 311 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 C1orf52Q8N6N3 182 aaKnown RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 OR1K1Q8NGR3 316 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 STAG3L4Q8TBR4 150 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 BCL2L2Q92843 193 aaPredicted RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 CFAP36Q96G28 342 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 CHIAQ9BZP6 476 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 ZNF385DQ9H6B1 395 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 FN3KRPQ9HA64 309 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 C3orf14Q9HBI5 128 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 NOX3Q9HBY0 568 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 UBQLN4Q9NRR5 601 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 FARSBQ9NSD9 589 aaKnown RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 DDX18Q9NVP1 670 aaKnown RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 RNF14Q9UBS8 474 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 LEF1Q9UJU2 399 aaPredicted RBP6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 SLC12A4Q9UP95 1085 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 CARD8Q9Y2G2 431 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 CMAHPQ9Y471 501 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 ANGPTL3Q9Y5C1 460 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 AUP1Q9Y679 476 aa6.02□□□□□ -1.45
PDLIM1-203ENST00000490391 TTC36A6NLP5 189 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 TRAPPC2LH3BP13 241 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 SCDO00767 359 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 CDC14BO60729 498 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 ULK1O75385 1050 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 PIAS1O75925 651 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 IPO7O95373 1038 aaKnown RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 NUDT14O95848 222 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 LGI1O95970 557 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 PLATP00750 562 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 RPLP1P05386 114 aaKnown RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 ZNF12P17014 697 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 NR4A1P22736 598 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 LCN1P31025 176 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 ELK3P41970 407 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 MAGEB1P43366 347 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 SLC12A2P55011 1212 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 LINC00310P59036 64 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 RAE1P78406 368 aaKnown RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 IKZF1Q13422 519 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 DAG1Q14118 895 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 MAD2L1BPQ15013 274 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 NDUFAF6Q330K2 333 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 TIGD2Q4W5G0 525 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 SYT14P1Q58G82 188 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 OTUD3Q5T2D3 398 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 KRT80Q6KB66 452 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 LINGO2Q7L985 606 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 MTERF4Q7Z6M4 381 aaKnown RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 LSRQ86X29 649 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 ZIC4Q8N9L1 334 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 GLB1L3Q8NCI6 653 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 OR6Y1Q8NGX8 325 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 PIGXQ8TBF5 258 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 MAGEE2Q8TD90 523 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 GPR151Q8TDV0 419 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 ELP4Q96EB1 424 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 ARL5BQ96KC2 179 aa6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 ZNF317Q96PQ6 595 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1-203ENST00000490391 BBS4Q96RK4 519 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms