RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 EDEM2Q9BV94 578 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 SCRT1Q9BWW7 348 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 CCL28Q9NRJ3 127 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 TBX21Q9UL17 535 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 SH3TC1Q8TE82 1336 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 IGKV2-28A0A075B6P5 120 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 RGSL1A5PLK6 1076 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 NPIPA7E9PJI5 369 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 TAPBPO15533 448 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 LRATO95237 230 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 SLC25A27O95847 323 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 IGKV2D-28P01615 120 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 IGHG4P01861 327 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 NPIPA8P0DM63 369 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 MMP11P24347 488 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 BTCP35070 178 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 KIR2DS4P43632 304 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 VDAC2P45880 294 aaPredicted RBP2.95□□□□□ -1.94
CCDC39-206ENST00000489868 P2RY1P47900 373 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 DLX1P56177 255 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 RIPK1Q13546 671 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 GGTLC2Q14390 218 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 USH1GQ495M9 461 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 TPGS2Q68CL5 300 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 KCNIP4Q6PIL6 250 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 SYT10Q6XYQ8 523 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 SLC38A6Q8IZM9 456 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 ACER1Q8TDN7 264 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 PELI1Q96FA3 418 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 FCRL1Q96LA6 429 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 P2RY13Q9BPV8 354 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 HDHD3Q9BSH5 251 aaPredicted RBP2.95□□□□□ -1.94
CCDC39-206ENST00000489868 NAT9Q9BTE0 207 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 ALG12Q9BV10 488 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 RWDD1Q9H446 243 aaPredicted RBP2.95□□□□□ -1.94
CCDC39-206ENST00000489868 COQ10BQ9H8M1 238 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 FOLH1BQ9HBA9 442 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 POPDC2Q9HBU9 364 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 NECAP2Q9NVZ3 263 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 TAS2R3Q9NYW6 316 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 ZNF282Q9UDV7 671 aaPredicted RBP2.95□□□□□ -1.94
CCDC39-206ENST00000489868 NPIPA1Q9UND3 350 aa2.95□□□□□ -1.94
CCDC39-206ENST00000489868 LRP4O75096 1905 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 IGKV6-21A0A0C4DH24 114 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 BTN3A3O00478 584 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 YWHABP31946 246 aaKnown RBP2.94□□□□□ -1.94
CCDC39-206ENST00000489868 HERVK_113P61574 105 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 HTD2P86397 168 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 CDC37Q16543 378 aaPredicted RBP2.94□□□□□ -1.94
CCDC39-206ENST00000489868 TIGD3Q6B0B8 471 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 OR52W1Q6IF63 320 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 MOB3BQ86TA1 216 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 H1FOOQ8IZA3 346 aaPredicted RBP2.94□□□□□ -1.94
CCDC39-206ENST00000489868 ZNF561Q8N587 486 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 DUSP18Q8NEJ0 188 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 OR4K14Q8NGD5 310 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 OR6X1Q8NH79 312 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 GIMAP1Q8WWP7 306 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 PAGE5Q96GU1 130 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 PELOQ9BRX2 385 aaKnown RBP2.94□□□□□ -1.94
CCDC39-206ENST00000489868 POLR1EQ9GZS1 481 aaKnown RBP2.94□□□□□ -1.94
CCDC39-206ENST00000489868 ELOVL3Q9HB03 270 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 TRAF3IP3Q9Y228 551 aa2.94□□□□□ -1.94
CCDC39-206ENST00000489868 FRMPD3Q5JV73 1810 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 A0A0G2JN53 185 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 AGPAT2O15120 278 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 MAPK13O15264 365 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 ADRB3P13945 408 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 MDH1P40925 334 aaKnown RBP2.93□□□□□ -1.94
CCDC39-206ENST00000489868 PMELP40967 661 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 RPS9P46781 194 aaKnown RBP2.93□□□□□ -1.94
CCDC39-206ENST00000489868 EFNB2P52799 333 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 RSPO1Q2MKA7 263 aaPredicted RBP2.93□□□□□ -1.94
CCDC39-206ENST00000489868 BLOC1S2Q6QNY1 142 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 GDPD3Q7L5L3 318 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 ZNF571Q7Z3V5 609 aaPredicted RBP2.93□□□□□ -1.94
CCDC39-206ENST00000489868 SAXO1Q8IYX7 474 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 CLEC4FQ8N1N0 589 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 RNF167Q9H6Y7 350 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 DMAP1Q9NPF5 467 aaPredicted RBP2.93□□□□□ -1.94
CCDC39-206ENST00000489868 SLC25A37Q9NYZ2 338 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 CLCF1Q9UBD9 225 aa2.93□□□□□ -1.94
CCDC39-206ENST00000489868 NUFIP1Q9UHK0 495 aaKnown RBP2.93□□□□□ -1.94
CCDC39-206ENST00000489868 PHF3Q92576 2039 aaKnown RBP2.93□□□□□ -1.94
CCDC39-206ENST00000489868 KDRP35968 1356 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 LRP5LA4QPB2 252 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 LAD1O00515 517 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 OPN1MWP04001 364 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 OPN1MW2P0DN77 364 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 OPN1MW3P0DN78 364 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 COX5AP20674 150 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 DRD5P21918 477 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 ANXA13P27216 316 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 CALCRP30988 508 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 HOXA9P31269 272 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 CD86P42081 329 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 BPIFB3P59826 476 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 REG3AQ06141 175 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 BOLA3Q53S33 107 aa2.92□□□□□ -1.94
CCDC39-206ENST00000489868 PIGGQ5H8A4 983 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms