RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 ZNF716A6NP11 495 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 BTN3A3O00478 584 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 IMPA2O14732 288 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 PPIHO43447 177 aaKnown RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 TRIM3O75382 744 aaPredicted RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 OPN1LWP04000 364 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 HBQ1P09105 142 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 H2BFMP0C1H6 154 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 ZNF735P0CB33 412 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 TNNI1P19237 187 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 PGCP20142 388 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 TBXA2RP21731 343 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 VDAC1P21796 283 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 LAP3P28838 519 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 NTSP30990 170 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 RPL4P36578 427 aaKnown RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 HPCAL1P37235 193 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 MAGEA8P43361 318 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 SYKP43405 635 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CCT3P49368 545 aaKnown RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 NUP107P57740 925 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 GBE1Q04446 702 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 KCNJ11Q14654 390 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 GPNMBQ14956 572 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CHI3L2Q15782 390 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 LRRC36Q1X8D7 754 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CFAP221Q4G0U5 840 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 TEX44Q53QW1 395 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CTSL3PQ5NE16 218 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 BEND3Q5T5X7 828 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CARD17Q5XLA6 110 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 ACSM5Q6NUN0 579 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 HACD2Q6Y1H2 254 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CENPQQ7L2Z9 268 aaPredicted RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 HSD11B1LQ7Z5J1 315 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 PAQR7Q86WK9 346 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 SLC38A6Q8IZM9 456 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 TMEM123Q8N131 208 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 DHRSXQ8N5I4 330 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 SPATA4Q8NEY3 305 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 NEIL3Q8TAT5 605 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CNIH3Q8TBE1 160 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 SLC22A8Q8TCC7 542 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 MARCH1Q8TCQ1 289 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 AGR3Q8TD06 166 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 C7orf33Q8WU49 177 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 PIGCQ92535 297 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 RPL3LQ92901 407 aaKnown RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 MCUR1Q96AQ8 359 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 IFT74Q96LB3 600 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CCNL2Q96S94 520 aaPredicted RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 NPY6RQ99463 290 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 COPS8Q99627 209 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 MTG1Q9BT17 334 aaPredicted RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 CHRDL1Q9BU40 450 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 GPR61Q9BZJ8 451 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 RHOJQ9H4E5 214 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 NTN4Q9HB63 628 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 MCCC2Q9HCC0 563 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 DDX18Q9NVP1 670 aaKnown RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 SLC2A8Q9NY64 477 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 SPRR3Q9UBC9 169 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CYTH4Q9UIA0 394 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 ANAPC7Q9UJX3 599 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 ZNF223Q9UK11 482 aaPredicted RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 PSG11Q9UQ72 335 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 PRG3Q9Y2Y8 225 aaPredicted RBP1.91□□□□□ -2.1
NF1-213ENST00000489712 NPTNQ9Y639 398 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 CDH10Q9Y6N8 788 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 ATP10DQ9P241 1426 aa1.91□□□□□ -2.1
NF1-213ENST00000489712 ANKRD30BQ9BXX2 1392 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 SMCO3A2RU48 225 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 SNTNA6NMZ2 147 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 H0YIV9 168 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 K7ENP7 123 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 WRBO00258 174 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 MSH4O15457 936 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 TIMM8AO60220 97 aaPredicted RBP1.9□□□□□ -2.11
NF1-213ENST00000489712 ZNF324O75467 553 aaPredicted RBP1.9□□□□□ -2.11
NF1-213ENST00000489712 SUPT7LO94864 414 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 TSPAN12O95859 305 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 KRT14P02533 472 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 ASGR1P07306 291 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 ANXA8P13928 327 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 POU2F1P14859 743 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 TPSB2P20231 275 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 IMPDH1P20839 514 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 HTR1EP28566 365 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 CD1BP29016 333 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 RDXP35241 583 aaKnown RBP1.9□□□□□ -2.11
NF1-213ENST00000489712 RPL13AP40429 203 aaKnown RBP1.9□□□□□ -2.11
NF1-213ENST00000489712 NOVA1P51513 510 aaKnown RBP1.9□□□□□ -2.11
NF1-213ENST00000489712 SEC61GP60059 68 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 RND3P61587 244 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 EWSR1Q01844 656 aaKnown RBP eCLIP1.9□□□□□ -2.11
NF1-213ENST00000489712 PLOD1Q02809 727 aaPredicted RBP1.9□□□□□ -2.11
NF1-213ENST00000489712 SRSF5Q13243 272 aaKnown RBP1.9□□□□□ -2.11
NF1-213ENST00000489712 TMED1Q13445 227 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 IL18Q14116 193 aa1.9□□□□□ -2.11
NF1-213ENST00000489712 TPSAB1Q15661 275 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms