RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SAXO2Q658L1 398 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 FAM166AQ6J272 317 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 ABHD12BQ7Z5M8 362 aaPredicted RBP8.2□□□□□ -1.1
SNX17-207ENST00000489402 CMIPQ8IY22 773 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 WDR31Q8NA23 367 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 POMGNT2Q8NAT1 580 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 TESCQ96BS2 214 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 FBXO17Q96EF6 278 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 NEURL3Q96EH8 262 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 SLC35A5Q9BS91 424 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 SLC7A10Q9NS82 523 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 MARCOQ9UEW3 520 aaPredicted RBP8.2□□□□□ -1.1
SNX17-207ENST00000489402 LGALS13Q9UHV8 139 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 MOKQ9UQ07 419 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 TMED7Q9Y3B3 224 aa8.2□□□□□ -1.1
SNX17-207ENST00000489402 TMEM72A0PK05 275 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 PRAMEF27A3QJZ7 478 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 CLDN24A6NM45 220 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 ATP6V1G2-DDX39BF2Z307 99 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 PDLIM1O00151 329 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 AP3D1O14617 1153 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 KRT33AO76009 404 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 LY6HO94772 140 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 GPIP06744 558 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 BPGMP07738 259 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 APEHP13798 732 aaKnown RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 IL7RP16871 459 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 CDH2P19022 906 aaPredicted RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 TACR3P29371 465 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 THBS2P35442 1172 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 CLNS1AP54105 237 aaKnown RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 TXNL4AP83876 142 aaKnown RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 SLC25A3Q00325 362 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 FUT5Q11128 374 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 SLC17A1Q14916 467 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 CARTPTQ16568 116 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 OTUD3Q5T2D3 398 aaPredicted RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 AP1ARQ63HQ0 302 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 PAQR6Q6TCH4 344 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 AAED1Q7RTV5 226 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 SLC46A3Q7Z3Q1 461 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 NUDCD3Q8IVD9 361 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 KIRREL3Q8IZU9 778 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 TRIML2Q8N7C3 387 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 WDR60Q8WVS4 1066 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 CNOT9Q92600 299 aaKnown RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 TMEM45BQ96B21 275 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 C3orf49Q96BT1 292 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 ZG16BQ96DA0 208 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 TRNT1Q96Q11 434 aaKnown RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 SF3B5Q9BWJ5 86 aaKnown RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 AKTIPQ9H8T0 292 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 CHODLQ9H9P2 273 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 MYOZ1Q9NP98 299 aaPredicted RBP8.19□□□□□ -1.1
SNX17-207ENST00000489402 OBP2BQ9NPH6 170 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 OSGIN1Q9UJX0 560 aa8.19□□□□□ -1.1
SNX17-207ENST00000489402 PLCE1Q9P212 2302 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 LOC100289279A0A1B0GTE1 492 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 AGAP5A6NIR3 686 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 E9PBE3 544 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 HMGN4O00479 90 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 FAAHO00519 579 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 SCN2BO60939 215 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 SNUPNO95149 360 aaKnown RBP8.18□□□□□ -1.1
SNX17-207ENST00000489402 CRYAAP02489 173 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 SERPINE1P05121 402 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 MYZAPP0CAP1 466 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 IMPDH2P12268 514 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 PAX7P23759 505 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 IGFBP5P24593 272 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 CXCR1P25024 350 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 S100A3P33764 101 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 SLC1A3P43003 542 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 NR4A2P43354 598 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 UBE2NP61088 152 aaKnown RBP8.18□□□□□ -1.1
SNX17-207ENST00000489402 CASP8Q14790 479 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 KRTAP24-1Q3LI83 254 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 FAM174BQ3ZCQ3 159 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 IQCCQ4KMZ1 466 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 SPANXN4Q5MJ08 99 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 MRPL2Q5T653 305 aaKnown RBP8.18□□□□□ -1.1
SNX17-207ENST00000489402 GPAT4Q86UL3 456 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 RNF130Q86XS8 419 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 ZNF440Q8IYI8 595 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 ARIH2OSQ8N7S6 290 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 ZNF781Q8N8C0 355 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 OR9K2Q8NGE7 335 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 SORCS2Q96PQ0 1159 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 VRK1Q99986 396 aaPredicted RBP8.18□□□□□ -1.1
SNX17-207ENST00000489402 C19orf24Q9BVV8 132 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 TAPBPLQ9BX59 468 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 ROPN1BQ9BZX4 212 aaPredicted RBP8.18□□□□□ -1.1
SNX17-207ENST00000489402 PIF1Q9H611 641 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 ROPN1Q9HAT0 212 aaPredicted RBP8.18□□□□□ -1.1
SNX17-207ENST00000489402 TMEM45AQ9NWC5 275 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 RAP2CQ9Y3L5 183 aa8.18□□□□□ -1.1
SNX17-207ENST00000489402 LOC390937A0A1W2PQ73 354 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms