RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SERAC1Q96JX3 654 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 OXGR1Q96P68 337 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 PANX2Q96RD6 677 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 KCNA7Q96RP8 456 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 CNN2Q99439 309 aaKnown RBP3.25□□□□□ -1.89
XRN1-213ENST00000489241 RBKSQ9H477 322 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 NIPAL2Q9H841 368 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 GLRX2Q9NS18 164 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 DDX18Q9NVP1 670 aaKnown RBP3.25□□□□□ -1.89
XRN1-213ENST00000489241 RSPH14Q9UHP6 348 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 IKZF2Q9UKS7 526 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 COPS3Q9UNS2 423 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 WDR19Q8NEZ3 1342 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 SMIM28A0A1B0GU29 152 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 DCTN6O00399 190 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 CTAG2O75638 210 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 OXSR1O95747 527 aaPredicted RBP3.24□□□□□ -1.89
XRN1-213ENST00000489241 P04436 131 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 TROVE2P10155 538 aaKnown RBP eCLIP3.24□□□□□ -1.89
XRN1-213ENST00000489241 MCF2P10911 925 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 KITLGP21583 273 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 NOVP48745 357 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 PKNOX1P55347 436 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 BIDP55957 195 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 DSCR10P59022 87 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 CHRNB3Q05901 458 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 PRR4Q16378 134 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 MICBQ29980 383 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 SBK1Q52WX2 424 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 C1orf185Q5T7R7 199 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 METTL11BQ5VVY1 283 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 OR52E8Q6IFG1 317 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 CGB2Q6NT52 195 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 ACOT7LQ6ZUV0 252 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 PGAP1Q75T13 922 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.24□□□□□ -1.89
XRN1-213ENST00000489241 AGR3Q8TD06 166 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 SETD7Q8WTS6 366 aaKnown RBP3.24□□□□□ -1.89
XRN1-213ENST00000489241 UFD1Q92890 307 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 PLEKHA8Q96JA3 519 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 ZNF641Q96N77 438 aaPredicted RBP3.24□□□□□ -1.89
XRN1-213ENST00000489241 MAPKAP1Q9BPZ7 522 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 KLHDC3Q9BQ90 382 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 ANKRA2Q9H9E1 313 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 RPS10P5Q9NQ39 176 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 THUMPD1Q9NXG2 353 aaKnown RBP3.24□□□□□ -1.89
XRN1-213ENST00000489241 HOXC10Q9NYD6 342 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 POGZQ7Z3K3 1410 aa3.24□□□□□ -1.89
XRN1-213ENST00000489241 TDRD15B5MCY1 1934 aaKnown RBP3.23□□□□□ -1.89
XRN1-213ENST00000489241 IGKV1D-8A0A087WSZ0 117 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 A0A1W2PQ72 361 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 TCP11X1B4DZS4 312 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 DFNA5O60443 496 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 STAMBPO95630 424 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 TMEM50AO95807 157 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 MMP1P03956 469 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 CT62P0C5K7 136 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 ANXA8P13928 327 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 FASP25445 335 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 ANXA13P27216 316 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 GDF1P27539 372 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 HTR1FP30939 366 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 CALCRP30988 508 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 MDH2P40926 338 aaKnown RBP3.23□□□□□ -1.89
XRN1-213ENST00000489241 PLK1P53350 603 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 ASPHQ12797 758 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 OXA1LQ15070 435 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 AANATQ16613 207 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 Q1RN00 199 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 C15orf32Q32M92 178 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 NSUN5P1Q3KNT7 163 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 OR2B11Q5JQS5 317 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 ANXA8L1Q5VT79 327 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 LRRC31Q6UY01 552 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 DNM1P46Q6ZS02 220 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 C19orf35Q6ZS72 473 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 PSTKQ8IV42 348 aaKnown RBP3.23□□□□□ -1.89
XRN1-213ENST00000489241 SKA3Q8IX90 412 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 NRMQ8IXM6 262 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 SLC39A11Q8N1S5 342 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 GPR137CQ8N3F9 429 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 GTPBP8Q8N3Z3 284 aaPredicted RBP3.23□□□□□ -1.89
XRN1-213ENST00000489241 CCDC148Q8NFR7 591 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 OR4F6Q8NGB9 312 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 OR4K14Q8NGD5 310 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 SEC22AQ96IW7 307 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 IFT74Q96LB3 600 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 MBOAT4Q96T53 435 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 CHP1Q99653 195 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 GAL3ST1Q99999 423 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 NMUR2Q9GZQ4 415 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 NEK6Q9HC98 313 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 PSMC3IPQ9P2W1 217 aaPredicted RBP3.23□□□□□ -1.89
XRN1-213ENST00000489241 STAP1Q9ULZ2 295 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 RPL36Q9Y3U8 105 aaKnown RBP3.23□□□□□ -1.89
XRN1-213ENST00000489241 PLEKHH1Q9ULM0 1364 aa3.23□□□□□ -1.89
XRN1-213ENST00000489241 TTC41PQ6P2S7 1318 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 IGHV1OR15-1A0A075B7D0 117 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms