RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CYP2B6P20813 491 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 FASP25445 335 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 GDF1P27539 372 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 DHPSP49366 369 aaPredicted RBP3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 GBX2P52951 348 aaPredicted RBP3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 OTUD4Q01804 1114 aaKnown RBP3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 TCP10Q12799 353 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 LAGE3Q14657 143 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 SLC1A5Q15758 541 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 MAJINQ3KP22 176 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 TIGITQ495A1 244 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 SLC25A30Q5SVS4 291 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 ATF7IP2Q5U623 682 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 MARC1Q5VT66 337 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 TTC23Q5W5X9 447 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 ZNF774Q6NX45 483 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 FBXL22Q6P050 247 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 FAHD2BQ6P2I3 314 aaPredicted RBP3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 KCNIP4Q6PIL6 250 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 GPR65Q8IYL9 337 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 OR52M1Q8NGK5 317 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 SLC5A11Q8WWX8 675 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 RLN3Q8WXF3 142 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 FAM3CQ92520 227 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 FAHD2AQ96GK7 314 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 C12orf66Q96MD2 445 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 PYGO2Q9BRQ0 406 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 DPH7Q9BTV6 452 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 IKZF5Q9H5V7 419 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 EXTL2Q9UBQ6 330 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 ZNF107Q9UII5 783 aaPredicted RBP3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 OARD1Q9Y530 152 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 COL11A1P12107 1806 aaPredicted RBP3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 PARP14Q460N5 1801 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 FRMPD4Q14CM0 1322 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 CLSPNQ9HAW4 1339 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 CDX4O14627 284 aaPredicted RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 NUDT21O43809 227 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 RHOBTB1O94844 696 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 CA1P00915 261 aaPredicted RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 GLRA2P23416 452 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 MDH2P40926 338 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 CSTF1Q05048 431 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 RIPPLY1Q0D2K3 151 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 MXD4Q14582 209 aaPredicted RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 GSG1Q2KHT4 349 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 KRTAP27-1Q3LI81 207 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 FKBP1CQ5VVH2 108 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 APOBEC3HQ6NTF7 200 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 FAM71F2Q6NXP2 309 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 RGS9BPQ6ZS82 235 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 CLDN19Q8N6F1 224 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 ANKFN1Q8N957 763 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 STXBP6Q8NFX7 210 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 TRMT10AQ8TBZ6 339 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 FAM151AQ8WW52 585 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 BADQ92934 168 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 PSMG2Q969U7 264 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 SH3YL1Q96HL8 342 aaPredicted RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 AMDHD1Q96NU7 426 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 CRNKL1Q9BZJ0 848 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 PPDPFQ9H3Y8 114 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 CAB39LQ9H9S4 337 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 SMPD3Q9NY59 655 aaPredicted RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 WRAP73Q9P2S5 460 aaPredicted RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 LCMT1Q9UIC8 334 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 ZNF221Q9UK13 617 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 RRP15Q9Y3B9 282 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 PPIAL4AQ9Y536 164 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 MAD1L1Q9Y6D9 718 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 DDX49Q9Y6V7 483 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 USP34Q70CQ2 3546 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 MYH8P13535 1937 aa3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 MYO5AQ9Y4I1 1855 aaKnown RBP3.73□□□□□ -1.81
PRPF38A-203ENST00000487160 MUC6Q6W4X9 2439 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 MYH1P12882 1939 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 BTN3A3O00478 584 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 OR7A17O14581 309 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 MSH4O15457 936 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 SERPINA2P20848 420 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 STARP49675 285 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 AP3M2P53677 418 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 ACTR1AP61163 376 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 RPL32P62910 135 aaKnown RBP3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 RAB40BQ12829 278 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 C10orf120Q5SQS8 335 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 CASC1Q6TDU7 716 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 TMEM110Q86TL2 294 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 ZNF683Q8IZ20 524 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 SYT14Q8NB59 555 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 STEAP2Q8NFT2 490 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 OR5L2Q8NGL0 311 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 N4BP2L2Q92802 583 aaPredicted RBP3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 SIGLEC12Q96PQ1 595 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 CITED1Q99966 193 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 EDEM2Q9BV94 578 aa3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 NXF5Q9H1B4 397 aaKnown RBP3.72□□□□□ -1.81
PRPF38A-203ENST00000487160 SPRR3Q9UBC9 169 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms