RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 VANGL1Q8TAA9 524 aaPredicted RBP13.08□□□□□ -0.32
LIMS3-205ENST00000487150 RNF217Q8TC41 542 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 ADAMTS16Q8TE57 1224 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 ABHD3Q8WU67 409 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 TPD52L3Q96J77 140 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 TMEM43Q9BTV4 400 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 SLC19A3Q9BZV2 496 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 UCK2Q9BZX2 261 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 C1orf21Q9H246 121 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 MUC13Q9H3R2 512 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 BCO1Q9HAY6 547 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 JKAMPQ9P055 326 aa13.08□□□□□ -0.32
LIMS3-205ENST00000487150 PRPF19Q9UMS4 504 aaKnown RBP13.08□□□□□ -0.32
LIMS3-205ENST00000487150 USP9YO00507 2555 aaPredicted RBP13.07□□□□□ -0.32
LIMS3-205ENST00000487150 PHF3Q92576 2039 aaKnown RBP13.07□□□□□ -0.32
LIMS3-205ENST00000487150 TRAV36DV7A0A075B6V5 113 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 NKX2-6A6NCS4 301 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 LIPT2A6NK58 231 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 B2RBV5 119 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 SMAD9O15198 467 aaKnown RBP13.07□□□□□ -0.32
LIMS3-205ENST00000487150 NPIPB7O75200 414 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 OR5F1O95221 314 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 STAMBPO95630 424 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 ZNF682O95780 498 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 IFNW1P05000 195 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 YES1P07947 543 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 AGTR1P30556 359 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 KIR2DL2P43627 348 aaPredicted RBP13.07□□□□□ -0.32
LIMS3-205ENST00000487150 CRYBA2P53672 197 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 TAS2R41P59536 307 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 SIRPAP78324 504 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 SLC25A3Q00325 362 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 RASGEF1BQ0VAM2 473 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 FOXF2Q12947 444 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 IFI44LQ53G44 452 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 FKBP9P1Q75LS8 142 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 COMTD1Q86VU5 262 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 CYP4Z1Q86W10 505 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 LIX1LQ8IVB5 337 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 ROBO4Q8WZ75 1007 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 SF3B5Q9BWJ5 86 aaKnown RBP13.07□□□□□ -0.32
LIMS3-205ENST00000487150 RBM24Q9BX46 236 aaKnown RBP13.07□□□□□ -0.32
LIMS3-205ENST00000487150 GORASP2Q9H8Y8 452 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 ELOVL5Q9NYP7 299 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 C6orf203Q9P0P8 240 aaPredicted RBP13.07□□□□□ -0.32
LIMS3-205ENST00000487150 CORINQ9Y5Q5 1042 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 SNX13Q9Y5W8 968 aa13.07□□□□□ -0.32
LIMS3-205ENST00000487150 DOPEY2Q9Y3R5 2298 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 IGKV3D-15A0A087WSY6 115 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 HTR3EA5X5Y0 456 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
LIMS3-205ENST00000487150 A8MXE2 369 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 CNOT4O95628 575 aaKnown RBP13.06□□□□□ -0.32
LIMS3-205ENST00000487150 MT-ATP6P00846 226 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 SERPINA1P01009 418 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 FPR1P21462 350 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 UQCRC1P31930 480 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 RBM34P42696 430 aaKnown RBP13.06□□□□□ -0.32
LIMS3-205ENST00000487150 SLC16A1P53985 500 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 CDH12P55289 794 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 H3F3AP84243 136 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 CDSNQ15517 529 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 OR7A5Q15622 319 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 FXNQ16595 210 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 DNAL1Q4LDG9 190 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 DEF8Q6ZN54 512 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 BEND4Q6ZU67 534 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 CBLL1Q75N03 491 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 LUZP2Q86TE4 346 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 RBM15BQ8NDT2 890 aaKnown RBP13.06□□□□□ -0.32
LIMS3-205ENST00000487150 STARD4Q96DR4 205 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 PRRC1Q96M27 445 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 CDRT15Q96T59 188 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 PSD2Q9BQI7 771 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 KLHL4Q9C0H6 718 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 ENKD1Q9H0I2 346 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 USP22Q9UPT9 525 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 PTPN13Q12923 2485 aa13.06□□□□□ -0.32
LIMS3-205ENST00000487150 ZC3H12DA2A288 527 aaKnown RBP13.05□□□□□ -0.32
LIMS3-205ENST00000487150 AQP7P3A6NL99 342 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 FZD7O75084 574 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 GOSR1O95249 250 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 IGFBP2P18065 325 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 CPOXP36551 454 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 RASSF2P50749 326 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 ST3GAL3Q11203 375 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 CEACAM7Q14002 265 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 NPTX1Q15818 432 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 MTX3Q5HYI7 312 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 OTUD3Q5T2D3 398 aaPredicted RBP13.05□□□□□ -0.32
LIMS3-205ENST00000487150 SP5Q6BEB4 398 aaPredicted RBP13.05□□□□□ -0.32
LIMS3-205ENST00000487150 GLYATQ6IB77 296 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 VWA1Q6PCB0 445 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 TTC33Q6PID6 262 aaPredicted RBP13.05□□□□□ -0.32
LIMS3-205ENST00000487150 PLXDC2Q6UX71 529 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 MEX3BQ6ZN04 569 aaKnown RBP13.05□□□□□ -0.32
LIMS3-205ENST00000487150 BTLAQ7Z6A9 289 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 GALNT5Q7Z7M9 940 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms