RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SH3D21A4FU49 640 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 CCT8L1PA6NM43 557 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 CPSF4LA6NMK7 179 aaKnown RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 A8MVM7 634 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 FAM220BPB1ANY3 271 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 M0QX08 132 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 CASKO14936 926 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 GSTA4O15217 222 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 CYTIPO60759 359 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 DCTN3O75935 186 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 MFN2O95140 757 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 IFNA14P01570 189 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 GPIP06744 558 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 KLK2P20151 261 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 FPR1P21462 350 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 CLK1P49759 484 aaKnown RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 MAP2K6P52564 334 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 PCBP3P57721 371 aaKnown RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 SLC35A1P78382 337 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 MXRA7P84157 204 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 IL1RL1Q01638 556 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 FAM27E3Q08E93 113 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 CEACAM7Q14002 265 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 OTUD3Q5T2D3 398 aaPredicted RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 BEND4Q6ZU67 534 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 GPAT4Q86UL3 456 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 ZNF100Q8IYN0 542 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 UBE2J2Q8N2K1 259 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 ANKK1Q8NFD2 765 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 FAM222BQ8WU58 562 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 PROX1Q92786 737 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 SLC35B4Q969S0 331 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 ZNF775Q96BV0 537 aaPredicted RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 C14orf79Q96F83 325 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 ZC3HAV1LQ96H79 300 aaKnown RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 PSD2Q9BQI7 771 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 GPATCH1Q9BRR8 931 aaKnown RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 NAA11Q9BSU3 229 aaPredicted RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 TRIM2Q9C040 744 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 EFCAB1Q9HAE3 211 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 ELOVL5Q9NYP7 299 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 USP22Q9UPT9 525 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 SLC9A8Q9Y2E8 581 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 ARL2BPQ9Y2Y0 163 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 NOSIPQ9Y314 301 aaKnown RBP9.1□□□□□ -0.95
NEK4-204ENST00000487068 CHST2Q9Y4C5 530 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 PDZD2O15018 2839 aa9.1□□□□□ -0.95
NEK4-204ENST00000487068 A0A1B0GWA3 101 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 C16orf97H3BN30 126 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 DNPH1O43598 174 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 EIF1BO60739 113 aaKnown RBP9.09□□□□□ -0.95
NEK4-204ENST00000487068 AKR7A3O95154 331 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 YES1P07947 543 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 CD247P20963 164 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 HTR2AP28223 471 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 RPS5P46782 204 aaKnown RBP9.09□□□□□ -0.95
NEK4-204ENST00000487068 SLC7A2P52569 658 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 GUSBP1Q15486 140 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 SWI5Q1ZZU3 235 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 C1orf140Q5VVS0 124 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 ANKRD34AQ69YU3 496 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 ABLIM2Q6H8Q1 611 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 ALKBH2Q6NS38 261 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 ZNF474Q6S9Z5 364 aaPredicted RBP9.09□□□□□ -0.95
NEK4-204ENST00000487068 CASP12Q6UXS9 341 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 NUFIP2Q7Z417 695 aaKnown RBP9.09□□□□□ -0.95
NEK4-204ENST00000487068 ATG4DQ86TL0 474 aaPredicted RBP9.09□□□□□ -0.95
NEK4-204ENST00000487068 COMTD1Q86VU5 262 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 TREML1Q86YW5 311 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 CCDC103Q8IW40 242 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 MICU2Q8IYU8 434 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 ZNF295-AS1Q8N0V1 137 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 C10orf53Q8N6V4 93 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 DNAJA4Q8WW22 397 aaPredicted RBP9.09□□□□□ -0.95
NEK4-204ENST00000487068 TAMM41Q96BW9 452 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 SLC25A36Q96CQ1 311 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 SLC47A1Q96FL8 570 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 TPD52L3Q96J77 140 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 MCHR1Q99705 422 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 POLDIP3Q9BY77 421 aaKnown RBP9.09□□□□□ -0.95
NEK4-204ENST00000487068 ADAM19Q9H013 955 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 EVA1AQ9H8M9 152 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 MCCC2Q9HCC0 563 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 GP6Q9HCN6 339 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 AP3M1Q9Y2T2 418 aa9.09□□□□□ -0.95
NEK4-204ENST00000487068 ELOVL7A1L3X0 281 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 TMEM229AB2RXF0 380 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 GPR171O14626 319 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 CGAP01215 116 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 IGHV3-9P01782 118 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 PNMTP11086 282 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 EPXP11678 715 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 IMPDH2P12268 514 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 CBLP22681 906 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 IL32P24001 234 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 CCKARP32238 428 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 UGT2B10P36537 528 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 LIPEQ05469 1076 aa9.08□□□□□ -0.96
NEK4-204ENST00000487068 FOXD4Q12950 439 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms