RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 HLA-DMAP28067 261 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 CD38P28907 300 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 CD1CP29017 333 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 HOXD12P35452 270 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 TALDO1P37837 337 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 INPP1P49441 399 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 GFERP55789 205 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 RPS4XP62701 263 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 BIKQ13323 160 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 PON3Q15166 354 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 SF3B4Q15427 424 aaKnown RBP eCLIP16.47■□□□□ 0.235e-7■■■□□ 19.1
PDLIM7-207ENST00000486828 ISXQ2M1V0 245 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 IL20RBQ6UXL0 311 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 SLC35F2Q8IXU6 374 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 FAM71CQ8NEG0 241 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 OR7G1Q8NGA0 311 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 OR4M2Q8NGB6 313 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 TGM7Q96PF1 710 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 DDOQ99489 341 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 TP63Q9H3D4 680 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 PDE7BQ9NP56 450 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 NRIP3Q9NQ35 241 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 A0A1W2PRG6 482 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 TLCD2A6NGC4 264 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 HYAL3O43820 417 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 EIF4EP06730 217 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 PSKH1P11801 424 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 CD27P26842 260 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 RBMS1P29558 406 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 DIO1P49895 249 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 GBX2P52951 348 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 ZP2Q05996 745 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 CDK5R1Q15078 307 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 CDONQ4KMG0 1287 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 SLC35D3Q5M8T2 416 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 FNDC7Q5VTL7 733 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 TMEM53Q6P2H8 277 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 PAMR1Q6UXH9 720 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 SAMD12Q8N8I0 201 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 NPEPL1Q8NDH3 523 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 OR51L1Q8NGJ5 315 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 OR14A16Q8NHC5 309 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 OIT3Q8WWZ8 545 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 TP53INP1Q96A56 240 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 SMIM19Q96E16 107 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 PELI1Q96FA3 418 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 TTTY10Q9BZA0 68 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 SPRTNQ9H040 489 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 NUFIP1Q9UHK0 495 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 DNAH14Q0VDD8 3507 aa16.46■□□□□ 0.23
PDLIM7-207ENST00000486828 IGKV1D-42A0A075B6H8 117 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 FAM240BA0A1B0GVZ2 78 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 C17orf105B2RV13 164 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 NPR2P20594 1047 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 ADH7P40394 386 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 NAA10P41227 235 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 PPM1FP49593 454 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 MED25Q71SY5 747 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 C17orf82Q86X59 251 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 DEFB119Q8N690 84 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 OR4M1Q8NGD0 313 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 LMF1Q96S06 567 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 GPX7Q96SL4 187 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 NMNAT3Q96T66 252 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 NMNAT2Q9BZQ4 307 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 CHRNA10Q9GZZ6 450 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 KLHL1Q9NR64 748 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 NPFFR2Q9Y5X5 522 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 TRAV1-2A0A0B4J238 106 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 CENPXA8MT69 81 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 RGS13O14921 159 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 IGF2P01344 180 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 CD1AP06126 327 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 SPI1P17947 270 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 RAB3BP20337 219 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 GDI2P50395 445 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 CLDN20P56880 219 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 PRPS1P60891 318 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 GRM7Q14831 915 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 WBP2NLQ6ICG8 309 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 GLCCI1Q86VQ1 547 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 ZNF527Q8NB42 609 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 OR13C5Q8NGS8 318 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 TRMT10AQ8TBZ6 339 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 UBASH3BQ8TF42 649 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 ZNRF4Q8WWF5 429 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 THAP4Q8WY91 577 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 UBQLN4Q9NRR5 601 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 NLKQ9UBE8 527 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 EPHA6Q9UF33 1036 aa16.45■□□□□ 0.22
PDLIM7-207ENST00000486828 MUC3AQ02505 3323 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 ELOA3DA6NLF2 546 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 METTL12A8MUP2 240 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 MAGEB4O15481 346 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 PNMTP11086 282 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 SRFP11831 508 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 SIRPAP78324 504 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 TDGQ13569 410 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 CD226Q15762 336 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms