RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MGRN1O60291 552 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 NPIPB7O75200 414 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 ELK4P28324 431 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 DNAJA1P31689 397 aaKnown RBP11.49□□□□□ -0.57
HDAC6-229ENST00000486665 SFTPDP35247 375 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 RBM34P42696 430 aaKnown RBP11.49□□□□□ -0.57
HDAC6-229ENST00000486665 TDGF1P3P51864 188 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 SUCLG1P53597 346 aaKnown RBP11.49□□□□□ -0.57
HDAC6-229ENST00000486665 LTBQ06643 244 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 SELENBP1Q13228 472 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 NHSL2Q5HYW2 709 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 ANKRD34AQ69YU3 496 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 VASNQ6EMK4 673 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 ZNF730Q6ZMV8 503 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 MBOAT2Q6ZWT7 520 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-229ENST00000486665 GGNQ86UU5 652 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 PQLC1Q8N2U9 271 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 STK35Q8TDR2 534 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 TAAR8Q969N4 342 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 CENPNQ96H22 339 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-229ENST00000486665 ARL5BQ96KC2 179 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 HS6ST2Q96MM7 605 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 TIMP4Q99727 224 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 TMEM43Q9BTV4 400 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 TMCC3Q9ULS5 477 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 A0A1W2PNR3 127 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 LRRN3E7EW58 273 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 LINC01387J3KSC0 135 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 AQP7O14520 342 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 ACTL6AO96019 429 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 TFPIP10646 304 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 IMPDH2P12268 514 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 POU3F2P20265 443 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-229ENST00000486665 PRKACGP22612 351 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 MAP2K6P52564 334 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 CLDN18P56856 261 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 CRYZQ08257 329 aaKnown RBP11.48□□□□□ -0.57
HDAC6-229ENST00000486665 C3AR1Q16581 482 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 MICAQ29983 383 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.48□□□□□ -0.57
HDAC6-229ENST00000486665 KRTCAP3Q53RY4 240 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 SYT14P1Q58G82 188 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 C1orf140Q5VVS0 124 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 C3orf33Q6P1S2 294 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 ZER1Q7Z7L7 766 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 NRMQ8IXM6 262 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 OR4K5Q8NGD3 323 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 OR5K1Q8NHB7 308 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 DDIT4LQ96D03 193 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 WDYHV1Q96HA8 205 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 ADGRG7Q96K78 797 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 GPA33Q99795 319 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 SLX1AQ9BQ83 275 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 BDH2Q9BUT1 245 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 PTDSS2Q9BVG9 487 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 POTEKPQ9BYX7 375 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 DCLRE1BQ9H816 532 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 C20orf141Q9NUB4 165 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 STX18Q9P2W9 335 aaKnown RBP11.48□□□□□ -0.57
HDAC6-229ENST00000486665 MED31Q9Y3C7 131 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 SPIN1Q9Y657 262 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-229ENST00000486665 POLEQ07864 2286 aa11.48□□□□□ -0.57
HDAC6-229ENST00000486665 FREM3P0C091 2139 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 TRAV36DV7A0A075B6V5 113 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 SAC3D1A6NKF1 404 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 NPIPA2E9PIF3 369 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 NPIPA3F8WFD2 350 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 TNFSF11O14788 317 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 SEC14L5O43304 696 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 E2F6O75461 281 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 CCNB2O95067 398 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 GASTP01350 101 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 IFI30P13284 250 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 ZNF708P17019 499 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 MAKP20794 623 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 FPR1P21462 350 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 CBLP22681 906 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 GCKP35557 465 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 RPS5P46782 204 aaKnown RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 OMPP47874 163 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 CLK1P49759 484 aaKnown RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 SRYQ05066 204 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 PRKCDQ05655 676 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 MYBPHQ13203 477 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 RIPK1Q13546 671 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 CTU2Q2VPK5 515 aaKnown RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 ZNF770Q6IQ21 691 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 PGBD2Q6P3X8 592 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 SHQ1Q6PI26 577 aaKnown RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 UBQLNLQ8IYU4 475 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 RNF113BQ8IZP6 322 aaKnown RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 ICA1LQ8NDH6 482 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 OR9Q2Q8NGE9 314 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 GIPC3Q8TF64 312 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 SLC25A43Q8WUT9 341 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 KLHL15Q96M94 604 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 OR5B2Q96R09 309 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 SLC19A3Q9BZV2 496 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms