RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 OR1K1Q8NGR3 316 aa16.69■□□□□ 0.26
CHRD-216ENST00000486066 TWIST2Q8WVJ9 160 aa16.69■□□□□ 0.26
CHRD-216ENST00000486066 NEU4Q8WWR8 484 aaPredicted RBP16.69■□□□□ 0.26
CHRD-216ENST00000486066 ZG16BQ96DA0 208 aa16.69■□□□□ 0.26
CHRD-216ENST00000486066 ZNF385AQ96PM9 386 aaKnown RBP16.69■□□□□ 0.26
CHRD-216ENST00000486066 SNX18Q96RF0 628 aa16.69■□□□□ 0.26
CHRD-216ENST00000486066 GATA5Q9BWX5 397 aaPredicted RBP16.69■□□□□ 0.26
CHRD-216ENST00000486066 TXLNGYQ9BZA5 131 aa16.69■□□□□ 0.26
CHRD-216ENST00000486066 FBXO9Q9UK97 447 aaPredicted RBP16.69■□□□□ 0.26
CHRD-216ENST00000486066 PCDHGB4Q9UN71 923 aa16.69■□□□□ 0.26
CHRD-216ENST00000486066 ZC3H12DA2A288 527 aaKnown RBP16.68■□□□□ 0.26
CHRD-216ENST00000486066 TMEM114B3SHH9 223 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 PIP5K1BO14986 540 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 LYPLA1O75608 230 aaPredicted RBP16.68■□□□□ 0.26
CHRD-216ENST00000486066 CPA3P15088 417 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 MATN1P21941 496 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 CRHR1P34998 444 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 P2RY4P51582 365 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 ARFIP2P53365 341 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 SLC35A1P78382 337 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 SPDYE7PQ495Y7 208 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 FRRS1Q6ZNA5 592 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 TRMT10CQ7L0Y3 403 aaKnown RBP16.68■□□□□ 0.26
CHRD-216ENST00000486066 LINGO2Q7L985 606 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 C6orf120Q7Z4R8 191 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 MYPOPQ86VE0 399 aaPredicted RBP16.68■□□□□ 0.26
CHRD-216ENST00000486066 CNPY4Q8N129 248 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 MAGEE2Q8TD90 523 aaPredicted RBP16.68■□□□□ 0.26
CHRD-216ENST00000486066 BCL2L2Q92843 193 aaPredicted RBP16.68■□□□□ 0.26
CHRD-216ENST00000486066 RACGAP1Q9H0H5 632 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 PIF1Q9H611 641 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 ATAD3AQ9NVI7 634 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 OSGIN1Q9UJX0 560 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 FIS1Q9Y3D6 152 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 SPEF1Q9Y4P9 236 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 VWFP04275 2813 aa16.68■□□□□ 0.26
CHRD-216ENST00000486066 TMEM72A0PK05 275 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 PRAMEF27A3QJZ7 478 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 CLDN24A6NM45 220 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 FAM157AC9JC47 383 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 CRYAAP02489 173 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 POU3F1Q03052 451 aaPredicted RBP16.67■□□□□ 0.26
CHRD-216ENST00000486066 PCLAFQ15004 111 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 ATP6AP1LQ52LC2 224 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 KLHL24Q6TFL4 600 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 UGT2A3Q6UWM9 527 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 RINLQ6ZS11 566 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 C10orf107Q8IVU9 208 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 CLEC4FQ8N1N0 589 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 C17orf53Q8N3J3 647 aaPredicted RBP16.67■□□□□ 0.26
CHRD-216ENST00000486066 OR4F15Q8NGB8 312 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 OR9K2Q8NGE7 335 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 ZNF563Q8TA94 476 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 FAM216AQ8WUB2 273 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 C3orf30Q96M34 536 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 ZNF317Q96PQ6 595 aaPredicted RBP16.67■□□□□ 0.26
CHRD-216ENST00000486066 SF3B5Q9BWJ5 86 aaKnown RBP16.67■□□□□ 0.26
CHRD-216ENST00000486066 POLE3Q9NRF9 147 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 TBK1Q9UHD2 729 aa16.67■□□□□ 0.26
CHRD-216ENST00000486066 TMED7-TICAM2A0A0A6YYA0 188 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 SNUPNO95149 360 aaKnown RBP16.66■□□□□ 0.26
CHRD-216ENST00000486066 CHRNGP07510 517 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 MAPK1P28482 360 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 RYKP34925 604 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 HTR3AP46098 478 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 LGALS3BPQ08380 585 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 C6orf136Q5SQH8 315 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 USP43Q70EL4 1123 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 PPP3R2Q96LZ3 170 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 NAA11Q9BSU3 229 aaPredicted RBP16.66■□□□□ 0.26
CHRD-216ENST00000486066 DUSP26Q9BV47 211 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 METTL17Q9H7H0 456 aaPredicted RBP16.66■□□□□ 0.26
CHRD-216ENST00000486066 TMED7Q9Y3B3 224 aa16.66■□□□□ 0.26
CHRD-216ENST00000486066 B4DSR2 109 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 hCG_2039718K7EN88 272 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 FAAHO00519 579 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 AP3D1O14617 1153 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 SCN2BO60939 215 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 LGI1O95970 557 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 PRPS1L1P21108 318 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 PCMT1P22061 227 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 THBS4P35443 961 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 IDH2P48735 452 aaKnown RBP16.65■□□□□ 0.26
CHRD-216ENST00000486066 MAP2K6P52564 334 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 HILS1P60008 231 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 KCNJ10P78508 379 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 HOMEZQ8IX15 550 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 CLECL1Q8IZS7 167 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 TMEM99Q8N816 258 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 UBASH3BQ8TF42 649 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 CNOT9Q92600 299 aaKnown RBP16.65■□□□□ 0.26
CHRD-216ENST00000486066 PMM1Q92871 262 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 OR51I1Q9H343 314 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 OCEL1Q9H607 264 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 TMEM45AQ9NWC5 275 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 WDR45Q9Y484 360 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 PCDHB14Q9Y5E9 798 aa16.65■□□□□ 0.26
CHRD-216ENST00000486066 LIPT2A6NK58 231 aa16.64■□□□□ 0.25
CHRD-216ENST00000486066 AQP7P3A6NL99 342 aa16.64■□□□□ 0.25
CHRD-216ENST00000486066 NR5A2O00482 541 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms