RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 MED13LQ71F56 2210 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 CIB4A0PJX0 185 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 CCT8L1PA6NM43 557 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 EVPLLA8MZ36 301 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 KLF4O43474 513 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 AHSA1O95433 338 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 CNOT4O95628 575 aaKnown RBP13.87□□□□□ -0.19
COL16A1-212ENST00000482478 PLAUP00749 431 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 BMP2P12643 396 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 IGHV1-2P23083 117 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 HOXC12P31275 282 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 SLC16A1P53985 500 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 HOXC5Q00444 222 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 CDK6Q00534 326 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 CEACAM7Q14002 265 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 SCARB2Q14108 478 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 CYP51A1Q16850 503 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 FBXW9Q5XUX1 488 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 ADAM5Q6NVV9 412 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 PAQR6Q6TCH4 344 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 TMEM171Q8WVE6 324 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 AKAP1Q92667 903 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL16A1-212ENST00000482478 C3orf49Q96BT1 292 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 MUCL1Q96DR8 90 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 USB1Q9BQ65 265 aaKnown RBP13.87□□□□□ -0.19
COL16A1-212ENST00000482478 SPATA5L1Q9BVQ7 753 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 BCL2L10Q9HD36 194 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 TMEM45AQ9NWC5 275 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 TRAPPC4Q9Y296 219 aa13.87□□□□□ -0.19
COL16A1-212ENST00000482478 A0A1W2PP18 115 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 LIPT2A6NK58 231 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 ELOA3DA6NLF2 546 aaPredicted RBP13.86□□□□□ -0.19
COL16A1-212ENST00000482478 A8MVM7 634 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 HS3ST1O14792 307 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 ARHGEF9O43307 516 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 EDF1O60869 148 aaKnown RBP13.86□□□□□ -0.19
COL16A1-212ENST00000482478 AKR7A3O95154 331 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 PGM3O95394 542 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 ETS2P15036 469 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 SLC6A2P23975 617 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 PRKAR1BP31321 381 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 ACAA2P42765 397 aaKnown RBP13.86□□□□□ -0.19
COL16A1-212ENST00000482478 BSPH1Q075Z2 132 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 FAPQ12884 760 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 ELOA3BQ3SY89 546 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 C1orf140Q5VVS0 124 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 SHEQ5VZ18 495 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 REEP3Q6NUK4 255 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 ATG4DQ86TL0 474 aaPredicted RBP13.86□□□□□ -0.19
COL16A1-212ENST00000482478 C10orf111Q8N326 155 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 KBTBD8Q8NFY9 601 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 ELOA3Q8NG57 546 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 RNF217Q8TC41 542 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 STON2Q8WXE9 905 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 PIP5K1AQ99755 562 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 CPPED1Q9BRF8 314 aaPredicted RBP13.86□□□□□ -0.19
COL16A1-212ENST00000482478 IKZF5Q9H5V7 419 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 CXorf56Q9H5V9 222 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 ASB6Q9NWX5 421 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 TAS2R16Q9NYV7 291 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 UPB1Q9UBR1 384 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 MALT1Q9UDY8 824 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 FLVCR1Q9Y5Y0 555 aa13.86□□□□□ -0.19
COL16A1-212ENST00000482478 VPS13CQ709C8 3753 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 AQP7P3A6NL99 342 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 CDH11P55287 796 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 RGS8P57771 180 aaPredicted RBP13.85□□□□□ -0.19
COL16A1-212ENST00000482478 MTPNP58546 118 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 NFYCQ13952 458 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 TIMM23BQ5SRD1 257 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 C9orf135Q5VTT2 229 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 YTHDF3Q7Z739 585 aaKnown RBP13.85□□□□□ -0.19
COL16A1-212ENST00000482478 LRRC75A-AS1Q8N1F1 130 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 OR9K2Q8NGE7 335 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 OR52E4Q8NGH9 312 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 OR52N5Q8NH56 324 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 FBXW5Q969U6 566 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 TMEM120AQ9BXJ8 343 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 ADAM19Q9H013 955 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 SELENONQ9NZV5 590 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 TESQ9UGI8 421 aaKnown RBP13.85□□□□□ -0.19
COL16A1-212ENST00000482478 NDUFAF1Q9Y375 327 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 CHST2Q9Y4C5 530 aa13.85□□□□□ -0.19
COL16A1-212ENST00000482478 RAI1Q7Z5J4 1906 aaPredicted RBP13.85□□□□□ -0.19
COL16A1-212ENST00000482478 ITPR3Q14573 2671 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 TRBV5-3A0A0A0MS03 114 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 PRORSD1PA6NEY8 169 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 TMEM229AB2RXF0 380 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 TROVE2P10155 538 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL16A1-212ENST00000482478 IL1RL1Q01638 556 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 NCMAPQ5T1S8 102 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 SSX8Q7RTT4 187 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 KRTAP1-3Q8IUG1 177 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 ARMC8Q8IUR7 673 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 ZNF433Q8N7K0 673 aaPredicted RBP13.84□□□□□ -0.19
COL16A1-212ENST00000482478 TMEM99Q8N816 258 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 HIPK4Q8NE63 616 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 SLC35B4Q969S0 331 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 ZNF607Q96SK3 696 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 TMEM204Q9BSN7 226 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms