RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ANPEPP15144 967 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 ATF4P18848 351 aaPredicted RBP10.53□□□□□ -0.72
HPS4-212ENST00000481910 MSX1P28360 303 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 RFC3P40938 356 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 OR1E2P47887 323 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 ERFP50548 548 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 PLGLB1Q02325 96 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 PLAURQ03405 335 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 FOXO1Q12778 655 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 SKP2Q13309 424 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 MTX3Q5HYI7 312 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 ENPP6Q6UWR7 440 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 FAM71CQ8NEG0 241 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 OR4K17Q8NGC6 315 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 PNPLA2Q96AD5 504 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 PYURFQ96I23 114 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 HSH2DQ96JZ2 352 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 C7orf34Q96L11 122 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 OLAHQ9NV23 265 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 FBXL2Q9UKC9 423 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 ICAM5Q9UMF0 924 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 DSPP15924 2871 aaKnown RBP10.53□□□□□ -0.72
HPS4-212ENST00000481910 USP24Q9UPU5 2620 aa10.53□□□□□ -0.72
HPS4-212ENST00000481910 LOC390937A0A1W2PQ73 354 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 ZNF98A6NK75 572 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 B4DXG7 233 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 NOS1APO75052 506 aaPredicted RBP10.52□□□□□ -0.72
HPS4-212ENST00000481910 TNFRSF1BP20333 461 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 RGS8P57771 180 aaPredicted RBP10.52□□□□□ -0.72
HPS4-212ENST00000481910 SGCAQ16586 387 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 ZNF550Q7Z398 422 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 ZNF440Q8IYI8 595 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 FAM86B1Q8N7N1 296 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 DTX3Q8N9I9 347 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 ZFP62Q8NB50 900 aaPredicted RBP10.52□□□□□ -0.72
HPS4-212ENST00000481910 OR5W2Q8NH69 310 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 VANGL1Q8TAA9 524 aaPredicted RBP10.52□□□□□ -0.72
HPS4-212ENST00000481910 ARSGQ96EG1 525 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 SEPHS2Q99611 448 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 WFDC6Q9BQY6 131 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 TTTY12Q9BZ98 90 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 EXOSC3Q9NQT5 275 aaKnown RBP10.52□□□□□ -0.72
HPS4-212ENST00000481910 RASSF1Q9NS23 344 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 NKX1-2Q9UD57 310 aaPredicted RBP10.52□□□□□ -0.72
HPS4-212ENST00000481910 SPATA2Q9UM82 520 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 LHX6Q9UPM6 363 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 SLC9A8Q9Y2E8 581 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 HRH3Q9Y5N1 445 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 ZZEF1O43149 2961 aa10.52□□□□□ -0.72
HPS4-212ENST00000481910 IGLV3-32A0A0A0MS00 114 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 TCRBV5S2A0A599 114 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 LRRC3CA6NJW4 275 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 AQP12BA6NM10 295 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 M0R3H8 397 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 KPNA4O00629 521 aaPredicted RBP10.52□□□□□ -0.73
HPS4-212ENST00000481910 TOR1AO14656 332 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 CDC40O60508 579 aaKnown RBP eCLIP10.52□□□□□ -0.73
HPS4-212ENST00000481910 RFPL3SP0C7P2 107 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 PRG2P13727 222 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 TALDO1P37837 337 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 HOXC5Q00444 222 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 PMP22Q01453 160 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 IFITM2Q01629 132 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 RIPPLY1Q0D2K3 151 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 CBFBQ13951 182 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 IFI44LQ53G44 452 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 PCSK4Q6UW60 755 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 CARM1Q86X55 608 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 AQP12AQ8IXF9 295 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 CENPSQ8N2Z9 138 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 FADS6Q8N9I5 356 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 OR2M3Q8NG83 312 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 OR6T1Q8NGN1 323 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 POP5Q969H6 163 aaKnown RBP10.52□□□□□ -0.73
HPS4-212ENST00000481910 MYDGFQ969H8 173 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 WBP1Q96G27 269 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 UGT2B28Q9BY64 529 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 EVA1AQ9H8M9 152 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 SRA1Q9HD15 236 aaKnown RBP10.52□□□□□ -0.73
HPS4-212ENST00000481910 B4GALT7Q9UBV7 327 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 TINAGQ9UJW2 476 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 PIEZO2Q9H5I5 2752 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 FREM3P0C091 2139 aa10.52□□□□□ -0.73
HPS4-212ENST00000481910 ANKUB1A6NFN9 424 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 FAM166BA8MTA8 275 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 ACOT7O00154 380 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 CLPTM1O96005 669 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 GLAP06280 429 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 PGCP20142 388 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 CCNA2P20248 432 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 GDF1P27539 372 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 RCVRNP35243 200 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 ACAA2P42765 397 aaKnown RBP10.51□□□□□ -0.73
HPS4-212ENST00000481910 SLC6A8P48029 635 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 ZNF41P51814 821 aaPredicted RBP10.51□□□□□ -0.73
HPS4-212ENST00000481910 SUMO3P55854 103 aaPredicted RBP10.51□□□□□ -0.73
HPS4-212ENST00000481910 KLRB1Q12918 225 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 EPS8Q12929 822 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 NRF1Q16656 503 aa10.51□□□□□ -0.73
HPS4-212ENST00000481910 KCTD21Q4G0X4 260 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms