RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SLC1A3P43003 542 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 KRTAP1-1Q07627 177 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 EPS8Q12929 822 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 GABRA6Q16445 453 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 OR7E24Q6IFN5 339 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 DTX2Q86UW9 622 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 PEX5LQ8IYB4 626 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 CADM2Q8N3J6 435 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 RADILQ96JH8 1075 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 VIPAS39Q9H9C1 493 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 THAP1Q9NVV9 213 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 RLIMQ9NVW2 624 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 PARPBPQ9NWS1 579 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 MALT1Q9UDY8 824 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 MGAT4BQ9UQ53 548 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 B3GALT5Q9Y2C3 310 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 SLC9A8Q9Y2E8 581 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 FLVCR1Q9Y5Y0 555 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 RTTNQ86VV8 2226 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 E7EQL1 145 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 SLC22A3O75751 556 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 ANP32DO95626 131 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 ITGA5P08648 1049 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 GKN3PP0CG01 181 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 CXCR1P25024 350 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 PTAFRP25105 342 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 CD40P25942 277 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 CRATP43155 626 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 NUDT6P53370 316 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 H3F3AP84243 136 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 OTUD3Q5T2D3 398 aaPredicted RBP13.4□□□□□ -0.26
LIMS3-203ENST00000480744 ZNF836Q6ZNA1 936 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 VRK2Q86Y07 508 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 ZNF440Q8IYI8 595 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 DEPDC4Q8N2C3 294 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 GLB1L3Q8NCI6 653 aaPredicted RBP13.4□□□□□ -0.26
LIMS3-203ENST00000480744 OR52P1PQ8NH57 321 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 ATP6V1G3Q96LB4 118 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 ADAD1Q96M93 576 aaKnown RBP13.4□□□□□ -0.26
LIMS3-203ENST00000480744 DHRS9Q9BPW9 319 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 CACNG6Q9BXT2 260 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 SLC7A10Q9NS82 523 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 SLC6A13Q9NSD5 602 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 P2RX2Q9UBL9 471 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 ADAM21Q9UKJ8 722 aa13.4□□□□□ -0.26
LIMS3-203ENST00000480744 DNHD1Q96M86 4753 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 FAAHO00519 579 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 SNNO75324 88 aaPredicted RBP13.39□□□□□ -0.27
LIMS3-203ENST00000480744 AKR7A3O95154 331 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 IL6P05231 212 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 BCHEP06276 602 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 GPIP06744 558 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 ETFAP13804 333 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 IDO1P14902 403 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 CDH2P19022 906 aaPredicted RBP13.39□□□□□ -0.27
LIMS3-203ENST00000480744 TTKP33981 857 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 FABP6P51161 128 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 SLC18A1P54219 525 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 CEACAM7Q14002 265 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 SLC17A1Q14916 467 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 OR7A5Q15622 319 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 NRF1Q16656 503 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 LIN52Q52LA3 116 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 PDCD4Q53EL6 469 aaKnown RBP13.39□□□□□ -0.27
LIMS3-203ENST00000480744 TSPO2Q5TGU0 170 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 ATG16L1Q676U5 607 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 PAQR6Q6TCH4 344 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 B3GLCTQ6Y288 498 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 FBXL14Q8N1E6 418 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 TMEM99Q8N816 258 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 HTRA1Q92743 480 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 MUS81Q96NY9 551 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 MDFIQ99750 246 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 RHNO1Q9BSD3 238 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 GRIP2Q9C0E4 1043 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 CACYBPQ9HB71 228 aaKnown RBP13.39□□□□□ -0.27
LIMS3-203ENST00000480744 YAE1D1Q9NRH1 226 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 CBLN4Q9NTU7 201 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 ATP23Q9Y6H3 246 aa13.39□□□□□ -0.27
LIMS3-203ENST00000480744 CDHR4A6H8M9 788 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 SLCO1B7G3V0H7 640 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 CRLF1O75462 422 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 THBS1P07996 1170 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 NCF2P19878 526 aaPredicted RBP13.38□□□□□ -0.27
LIMS3-203ENST00000480744 MAP2K6P52564 334 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 CRISP3P54108 245 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 DSTNP60981 165 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 COPZ1P61923 177 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 IRX1P78414 480 aaPredicted RBP13.38□□□□□ -0.27
LIMS3-203ENST00000480744 TGFBR3Q03167 851 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 BNIP2Q12982 314 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 MAPK11Q15759 364 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 GSTA3Q16772 222 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 GTDC1Q4AE62 458 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 SLC9B1Q4ZJI4 515 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 RPS26P11Q5JNZ5 115 aaPredicted RBP13.38□□□□□ -0.27
LIMS3-203ENST00000480744 AAED1Q7RTV5 226 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 GPAT4Q86UL3 456 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 MUC15Q8N387 334 aa13.38□□□□□ -0.27
LIMS3-203ENST00000480744 WDR31Q8NA23 367 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms