RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 BRCC3P46736 316 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 QARSP47897 775 aaKnown RBP5.12□□□□□ -1.59
RC3H1-204ENST00000479099 GLUD2P49448 558 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 XKP51811 444 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 KPNA2P52292 529 aaKnown RBP5.12□□□□□ -1.59
RC3H1-204ENST00000479099 RIPK4P57078 832 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 ERVS71-1P61550 626 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 NHLH1Q02575 133 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 SMARCB1Q12824 385 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 SF3B4Q15427 424 aaKnown RBP eCLIP5.12□□□□□ -1.592e-9■■□□□ 11.7
RC3H1-204ENST00000479099 HAGHQ16775 308 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 RPEL1Q2QD12 228 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 LRRC37A5PQ49AS3 106 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 DMRTC1Q5HYR2 192 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 PDSS1Q5T2R2 415 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 DDI2Q5TDH0 399 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 PRR5LQ6MZQ0 368 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 STEAP1BQ6NZ63 245 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 LINC00336Q6ZUF6 198 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 RFPL4BQ6ZWI9 263 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 Q71RC1 249 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-204ENST00000479099 TMEM25Q86YD3 366 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 RELL2Q8NC24 303 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-204ENST00000479099 NOXO1Q8NFA2 376 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 OR5T2Q8NGG2 359 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 OR4Q3Q8NH05 313 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 OR2L2Q8NH16 312 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 DTD1Q8TEA8 209 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 NXPE2Q96DL1 559 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 PACRGQ96M98 296 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-204ENST00000479099 MCCC1Q96RQ3 725 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-204ENST00000479099 ATP5SQ99766 215 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 TIMM29Q9BSF4 260 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 DEFB129Q9H1M3 183 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 C12orf10Q9HB07 376 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 C1orf109Q9NX04 203 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 BFARQ9NZS9 450 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 SLC17A4Q9Y2C5 497 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 MRPS28Q9Y2Q9 187 aaKnown RBP5.12□□□□□ -1.59
RC3H1-204ENST00000479099 AP3M1Q9Y2T2 418 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 CACNG2Q9Y698 323 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 NACADO15069 1562 aa5.12□□□□□ -1.59
RC3H1-204ENST00000479099 TAF1P21675 1872 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 KIR2DS5A0A0G2JLQ3 304 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TRBV5-5A0A0J9YX44 114 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 KIR2DS3K7RE56 304 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TIMM23O14925 209 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 SGCEO43556 437 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 ATP5LO75964 103 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PLEKHA8P1O95397 391 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 AP2A1O95782 977 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 HMGN1P05114 100 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 DPEP1P16444 411 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 CTRB1P17538 263 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 HLA-GP17693 338 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PSMC3P17980 439 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 IDSP22304 550 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 CMA1P23946 247 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 COILP38432 576 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 CSNK1A1P48729 337 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PRLHRP49683 370 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TMED10P49755 219 aaKnown RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 NKX2-5P52952 324 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 RPS15AP62244 130 aaKnown RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 HOXA4Q00056 320 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 DPTQ07507 201 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 SRSF1Q07955 248 aaKnown RBP eCLIP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 MGAT3Q09327 533 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 EZH2Q15910 746 aaKnown RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TMEM249Q2WGJ8 235 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 ZNF672Q499Z4 452 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 SOHLH1Q5JUK2 328 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 CEP85LQ5SZL2 805 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TPRG1LQ5T0D9 272 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PRAMEF17Q5VTA0 474 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 CTRB2Q6GPI1 263 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 SHC4Q6S5L8 630 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TIPARPQ7Z3E1 657 aaKnown RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TAC4Q86UU9 113 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 LMNTD1Q8N9Z9 388 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 OR5M9Q8NGP3 310 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 ACTL9Q8TC94 416 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 MAGEC3Q8TD91 643 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 ART4Q93070 314 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 RPEQ96AT9 228 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TIMP4Q99727 224 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PAPOLGQ9BWT3 736 aaKnown RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 ACTR3CQ9C0K3 210 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PLEKHA1Q9HB21 404 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 SLC25A19Q9HC21 320 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PLCXD1Q9NUJ7 323 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PLEKHJ1Q9NW61 149 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 DUS2Q9NX74 493 aaKnown RBP5.11□□□□□ -1.59
RC3H1-204ENST00000479099 NDE1Q9NXR1 346 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 TUBGCP4Q9UGJ1 667 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 ZNHIT2Q9UHR6 403 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 ICAM5Q9UMF0 924 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 SYNJ2O15056 1496 aa5.11□□□□□ -1.59
RC3H1-204ENST00000479099 A0A087X1B8 175 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms