RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 KCNE5Q9UJ90 142 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 HEATR5AQ86XA9 2040 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 KIAA1549Q9HCM3 1950 aa12.99□□□□□ -0.33
USP11-207ENST00000478596 NCKAP5O14513 1909 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 ANKRD33BA6NCL7 494 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 CFAP73A6NFT4 308 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 LRRC3CA6NJW4 275 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 C17orf51A8MQB3 221 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 A8MXE2 369 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 M0R3H8 397 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 SNPHO15079 494 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 FRS3O43559 492 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 NQO1P15559 274 aaKnown RBP12.98□□□□□ -0.33
USP11-207ENST00000478596 LOXP28300 417 aaPredicted RBP12.98□□□□□ -0.33
USP11-207ENST00000478596 SLC6A8P48029 635 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 COPZ1P61923 177 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 EEF1A1P68104 462 aaKnown RBP12.98□□□□□ -0.33
USP11-207ENST00000478596 TRAP1Q12931 704 aaKnown RBP12.98□□□□□ -0.33
USP11-207ENST00000478596 CBFBQ13951 182 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 IFI44LQ53G44 452 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 C6orf52Q5T4I8 152 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 LCN8Q6JVE9 175 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 TMEM81Q6P7N7 255 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 APOOLQ6UXV4 268 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 DEF8Q6ZN54 512 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 ZNF550Q7Z398 422 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 PLCZ1Q86YW0 608 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 DUSP19Q8WTR2 217 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 GEMIN6Q8WXD5 167 aaKnown RBP12.98□□□□□ -0.33
USP11-207ENST00000478596 CNOT9Q92600 299 aaKnown RBP12.98□□□□□ -0.33
USP11-207ENST00000478596 SLC47A1Q96FL8 570 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 ZFP3Q96NJ6 502 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 PIGMQ9H3S5 423 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 DSN1Q9H410 356 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 RLIMQ9NVW2 624 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 SELENONQ9NZV5 590 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 MED11Q9P086 117 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 LPAR3Q9UBY5 353 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 POMPQ9Y244 141 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 SH3GLB1Q9Y371 365 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 USF3Q68DE3 2245 aa12.98□□□□□ -0.33
USP11-207ENST00000478596 FREM3P0C091 2139 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 CDHR4A6H8M9 788 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 ANKRD65E5RJM6 399 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 AP3D1O14617 1153 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 EIF4E2O60573 245 aaKnown RBP12.97□□□□□ -0.33
USP11-207ENST00000478596 TRAPPC6AO75865 159 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 IFNW1P05000 195 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 FESP07332 822 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 LINGO3P0C6S8 592 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 PGCP20142 388 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 PSMA4P25789 261 aaKnown RBP12.97□□□□□ -0.33
USP11-207ENST00000478596 GCKP35557 465 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 PTGDSP41222 190 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 P2RX1P51575 399 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 SUMO3P55854 103 aaPredicted RBP12.97□□□□□ -0.33
USP11-207ENST00000478596 FOXF2Q12947 444 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 SKP2Q13309 424 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 VTCN1Q7Z7D3 282 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 CARM1Q86X55 608 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 CADM2Q8N3J6 435 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 C9orf106Q8NAJ2 232 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 OR14L1PQ8NHC6 308 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 SEPHS2Q99611 448 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 PIGQQ9BRB3 760 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 GORASP2Q9H8Y8 452 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 AURKCQ9UQB9 309 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 VDAC3Q9Y277 283 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 C15orf41Q9Y2V0 281 aa12.97□□□□□ -0.33
USP11-207ENST00000478596 OIP5O43482 229 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 TPST1O60507 370 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 GCM2O75603 506 aaPredicted RBP12.96□□□□□ -0.33
USP11-207ENST00000478596 PRKD3O94806 890 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 GKN3PP0CG01 181 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 TNFRSF1BP20333 461 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 CD247P20963 164 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 IFNA8P32881 189 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 IDUAP35475 653 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 KCNJ5P48544 419 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 SRSF2Q01130 221 aaKnown RBP12.96□□□□□ -0.33
USP11-207ENST00000478596 GLIPR1L2Q4G1C9 344 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 FAM98BQ52LJ0 330 aaKnown RBP12.96□□□□□ -0.33
USP11-207ENST00000478596 NHSL2Q5HYW2 709 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 FNDC7Q5VTL7 733 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 RAET1LQ5VY80 246 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 TIGD3Q6B0B8 471 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 VASNQ6EMK4 673 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 PGM2L1Q6PCE3 622 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 ENPP6Q6UWR7 440 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 CBLL1Q75N03 491 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 BTLAQ7Z6A9 289 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 CYP4Z1Q86W10 505 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 CLIP4Q8N3C7 705 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 OR5W2Q8NH69 310 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 POP5Q969H6 163 aaKnown RBP12.96□□□□□ -0.33
USP11-207ENST00000478596 UGT2B28Q9BY64 529 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 RTN4RQ9BZR6 473 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 LAT2Q9GZY6 243 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 EVA1AQ9H8M9 152 aa12.96□□□□□ -0.33
USP11-207ENST00000478596 EXOSC3Q9NQT5 275 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms