RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 PGS1Q32NB8 556 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 C3orf36Q3SXR2 165 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 PAQR6Q6TCH4 344 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 UGT2A3Q6UWM9 527 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 OLIG3Q7RTU3 272 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 C4orf33Q8N1A6 199 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 ANKS4BQ8N8V4 417 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 XAGE5Q8WWM1 108 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 HPS1Q92902 700 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 DNAJA3Q96EY1 480 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 SLC38A2Q96QD8 506 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 KATNB1Q9BVA0 655 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 BPESC1Q9GZL8 116 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 RAB1BQ9H0U4 201 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 PLK3Q9H4B4 646 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 MOV10Q9HCE1 1003 aaKnown RBP8.41□□□□□ -1.06
CCM2-210ENST00000478169 CA10Q9NS85 328 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 TMEM45AQ9NWC5 275 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 TMED7Q9Y3B3 224 aa8.41□□□□□ -1.06
CCM2-210ENST00000478169 IGHV1-18A0A0C4DH31 117 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 TMEM72A0PK05 275 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 FAAHO00519 579 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 KLF11O14901 512 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 STAMBPO95630 424 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 SHBGP04278 402 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ERCC1P07992 297 aaPredicted RBP8.4□□□□□ -1.06
CCM2-210ENST00000478169 TACSTD2P09758 323 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 OR4A8P0C604 315 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 OR12D1P0DN82 309 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 CCNA2P20248 432 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 UQCRC2P22695 453 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 SLC1A3P43003 542 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 IDH3GP51553 393 aaPredicted RBP8.4□□□□□ -1.06
CCM2-210ENST00000478169 CHN2P52757 468 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 EMX2Q04743 252 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 RUNX1T1Q06455 604 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ADIPOQQ15848 244 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ZSWIM7Q19AV6 140 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 SMU1Q2TAY7 513 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 TBRG1Q3YBR2 411 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 HIKESHIQ53FT3 197 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 OR4F3Q6IEY1 312 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 FRRS1Q6ZNA5 592 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 AAED1Q7RTV5 226 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 SPATA19Q7Z5L4 167 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 MEX3DQ86XN8 651 aaKnown RBP8.4□□□□□ -1.06
CCM2-210ENST00000478169 CMIPQ8IY22 773 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 CLECL1Q8IZS7 167 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 CLEC4FQ8N1N0 589 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ZIC4Q8N9L1 334 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 OR4F15Q8NGB8 312 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 OR8J2Q8NGG1 315 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 OR4A15Q8NGL6 344 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 AGR3Q8TD06 166 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ROPN1LQ96C74 230 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 TUBGCP3Q96CW5 907 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ZG16BQ96DA0 208 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ZNF317Q96PQ6 595 aaPredicted RBP8.4□□□□□ -1.06
CCM2-210ENST00000478169 SOX7Q9BT81 388 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 MKS1Q9NXB0 559 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ASIC5Q9NY37 505 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 CRNNQ9UBG3 495 aaPredicted RBP8.4□□□□□ -1.06
CCM2-210ENST00000478169 TMEFF2Q9UIK5 374 aaPredicted RBP8.4□□□□□ -1.06
CCM2-210ENST00000478169 OSGIN1Q9UJX0 560 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 PRDM4Q9UKN5 801 aa8.4□□□□□ -1.06
CCM2-210ENST00000478169 ARPC4-TTLL3A0A0A6YYG9 625 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 A0A0A6YYJ9 748 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 PRSS51A0A1B0GVH4 220 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 LRP5LA4QPB2 252 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 OR6C65A6NJZ3 312 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 AQP7P3A6NL99 342 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 SMIM23A6NLE4 172 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 VSTM5A8MXK1 200 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 SLCO1B7G3V0H7 640 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 SCN2BO60939 215 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 LILRA1O75019 489 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 KRT33AO76009 404 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 SNUPNO95149 360 aaKnown RBP8.39□□□□□ -1.07
CCM2-210ENST00000478169 GPIP06744 558 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 HOXB1P14653 301 aaPredicted RBP8.39□□□□□ -1.07
CCM2-210ENST00000478169 UQCRBP14927 111 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 ITGA2P17301 1181 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 CDH2P19022 906 aaPredicted RBP8.39□□□□□ -1.07
CCM2-210ENST00000478169 PCMT1P22061 227 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 TACR3P29371 465 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 SRP14P37108 136 aaKnown RBP8.39□□□□□ -1.07
CCM2-210ENST00000478169 KHKP50053 298 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 HPCAP84074 193 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 NAAAQ02083 359 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 PLAURQ03405 335 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 FUT5Q11128 374 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 OTUD3Q5T2D3 398 aaPredicted RBP8.39□□□□□ -1.07
CCM2-210ENST00000478169 SAXO2Q658L1 398 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 TNFAIP8L2Q6P589 184 aaPredicted RBP8.39□□□□□ -1.07
CCM2-210ENST00000478169 ANKRD16Q6P6B7 361 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 C12orf54Q6X4T0 127 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 FAM169BQ8N8A8 192 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 LINC01356Q8N9X3 169 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 VPS37AQ8NEZ2 397 aa8.39□□□□□ -1.07
CCM2-210ENST00000478169 NUP37Q8NFH4 326 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms